Genomic Location: Sc7jCM8_665:2586248...2597314
NR annotation: XP_020629617.1, nischarin-like [Orbicella faveolata]
| CDS | ||||
| LOC110066713 | ||||
| Transcript |
| rna-XM_020773958.1 |
| Protein |
| XP_020629617.1 |
| Uniprot term | Description |
|---|---|
| Q80TM9 | Nischarin OS=Mus musculus OX=10090 GN=Nisch PE=1 SV=2 |
| Q4G017 | Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| PF00787 | PX | PX domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15454 | NISCHARIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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