Gene detail

Detailed information of XP_020630468.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_728:938764...941861
NR annotation: XP_020630468.1, uncharacterized protein LOC110067483 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020774809.1

TTACCGTCATGGTTCAAAATAAGGTTAAATTTGCCTCGCCTGTCGATAGATTAAGACGCTCAGTTGAATAGTTTTAGCGCTATGGAAATTTGATACTGTAAGAATTTGCCGAAGGTAGGTCCGTCCTAAGATCGTGATCGGTCGATAAGGTTTCGGAAATTCTCGGAAGTTGCTTAGCAAAAGCTGTAACAAGAATGGCGGAGAATTGACTATGCATTCTGCAAACGCAGATGGACTAACAGAAAGAACAAGGGGAAAAAACAGAGATTTGATTCACGACTCAATGATTGCTAGAACGCCAGTTTCGTCTGGAGCGAGACGTTTCAGCGAAGGAAAGTTTGGAGGACAACCACAATCACATCATGGTGAAAGACCAATGAGTGGCAGGTCGCTAGACAGCCCAGTACCCCCAAATAATACAGCACAGACATCCCAACATAGGCCTCATTCAAATCAAAGACCATTTCAAGATGGAAGCCATCTGTTACGACGTCATACCACAGAGGACCTTATCTCTTCTAATGAACACAAATTTTCAGGAAGTAATGCTTCATTTGTTCCTAGACCTCCATCACGGCACTTTGCAGGTATAGAAGGTCGTCCAAAATCAGCCAGGGGTCGTGTACGTCCGACGTCCCAGCCTGGGAGAGAGACTAAAGCTTCAAGAGAAAATCTGCAGCGTGTTGGGGAACAAGTTCCTTTCCCACCTCTAAAATCACAATCATCATTCTCAAAGTACAAGCCACTTCCTTCTATTGGTACAGGACTTGTTGTTGAACCTGATGGGGACCATCCTTCTCACCATTCTGGTGTAAAAAGCAAacatgataatgacaatgacaatctTATGTTGCTACAAAAGACAGCTGATCTGTCATTACATTATACACTTCCTGATGAACCAAAAGATACAGAGCCACAAAGGATACATCTTGCTATCAGACTTTTAGATGGATCTCGTCATGAAAGATGGTTTAGACACACTGACACACTAGGAACGGTGCTGGCTTTTGCTGAGTCAgcaagtaaaaataaacttcctccTTGCCAGTTCTGCACCAATGAAGTGCCAAGACGggtttttgacaatttttctgAAAGCCTGATACAAGCTGGTATAACCTCAAGGACAGTTCTGTATCTTGAAGACATAGTGTAGCTTCAGTTGTCAATAAGATATACTGTGTTGTACTTCCCTAATCCAGTGCCATCTATATGATGTGGACTGCCAGTCATTAAGTCCCAGTCAATTTTACACCCTCTTAATCTGTTGGCAGACAACTTTTACAACTTGCCATCTGGTTGTAGCCCCCATGCAGATGCTCAGAGCATCTGCATGGGAGGCTAATCTGCTCATGGATCAAATGATATTAATATGTCTGTTCCTGGAAGTCTCATATATATACACATTACAAAATAACGAACTGTCTGTATTTCAAATAAGAATGGTATATAATATGTTGATAATTAAGCAGATGTACAACTAGTTATACAAATATTATACTAAGGGACTAAAGTATATTTAAACTGTGTGATAGAAATTATTTGTGCAGCTCTCAGACTGCAAAATGTACAGGGgtgacaaaataaattatttaccatACTCAATGAATAGTTCATACCAGATATGTACTGTATCCGCTGCTGCAATTTACTTAACTTAACacttaaactaaattaaaagaatattttgaacaaatgtaAACTATCAATCAATTATTAGGTTAGATAATTTTTAGATTCTAGGGGTGCAAAGTAACGGGCTTTGACATTCATAACACTTTGAAataatgttgtttgtttgttacttttaattattgctATTTATTGCTcacaaataataaagaaagaaagaacctGTCTATCAGAAGCCATGATATATTAGGGAGAACTCTGATATTTGCATGACCAGTGTTTCCTGTTATGGGATTTTTTCCAGGGGGGGAAATCCCATATAAACAGGATGGGGGTGCTGGttggaaatattgaaaagaactcctaagagaATACTAAGATCCTGTTATTTGGGCATGGcttcaaaattttttcaccactaagaggtactaattctaaaacaatgCATTTGCTGAATGTACTCTTTTACTGATGAGTTGTGAATTCATGGtgtaaatgagacaaaattatAAATCAGTTCCTTTTTATATTGAAGTAGTCTTCCTGGTGGGAATTCCattctgatttcttttgtttccctgacactactatgatcaaatttttactcCTTGATTTTTTTAGGTTAATCACATATAATTCTACAAAAGTTTAAAGATGCCGTTTACCATTTacaaatatctgcattggttccggagatatttaagtttaaaaaaatgagtaaaatatgcaaatgagatgactatGATGTCATACACCCaaccaaatattacatcaagtatataaatagcgCTATCTTGGTCACTTTGcagcagaaaccattgaaaattGGTAGCCTAATAGTTCTAAATGCAACACACCTACAGCTATAATCATTTCCATTCCCATGGCaacccactcttttccagtcctctctagcctgatttcaatattttagtaattttaagcttggaaaacattaaacaaggcaATGAACTCAACCTAACGTATT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|UBX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001012	Domain	UBX domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR050730	Family	UBX domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23322	FAS-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan