Genomic Location: Sc7jCM8_1258:175084...212760
NR annotation: XP_020630842.1, sortilin-related receptor-like [Orbicella faveolata]
| CDS | ||||
| LOC110067835 | ||||
| Transcript |
| rna-XM_020775183.1 |
| Protein |
| XP_020630842.1 |
| Uniprot term | Description |
|---|---|
| Q98930 | Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1 |
| O88307 | Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3 |
| P0DSP1 | Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00058 | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| PF15902 | Sortilin-Vps10 | Sortilin, neurotensin receptor 3, | Repeat | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF15901 | Sortilin_C | Sortilin, neurotensin receptor 3, C-terminal | Domain | Interproscan |
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR000033 | Repeat | LDLR class B repeat | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR051221 | Family | Low-density lipoprotein receptor-related | Interproscan |
| IPR031778 | Domain | Sortilin, N-terminal | Interproscan |
| IPR031777 | Domain | Sortilin, C-terminal | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR006581 | Domain | VPS10 | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22722 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006898 | Biological Process | receptor-mediated endocytosis | Interproscan |
| GO:0016324 | Cellular Component | apical plasma membrane | Interproscan |
| GO:0042562 | Molecular Function | hormone binding | Interproscan |
| GO:0043235 | Cellular Component | receptor complex | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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