Detailed information of XP_020631129.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_754:1162961...1189187
NR annotation: XP_020631129.1, E3 ubiquitin-protein ligase SHPRH-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TPQ3E3 ubiquitin-protein ligase SHPRH OS=Mus musculus OX=10090 GN=Shprh PE=1 SV=1
Q149N8E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens OX=9606 GN=SHPRH PE=1 SV=2
Q9UTL9Uncharacterized ATP-dependent helicase C144.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC144.05 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21325SHPRH_helical-1stE3 ubiquitin-protein ligase SHPRH, first helical domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF21324SHPRH_helical-2ndE3 ubiquitin-protein ligase SHPRH, second helical domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR048686DomainE3 ubiquitin-protein ligase SHPRH, first helical domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR048695DomainE3 ubiquitin-protein ligase SHPRH, second helical domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR052583FamilyATP-dependent Helicase/E3 Ubiquitin LigaseInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45865E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15710SHPRH; E3 ubiquitin-protein ligase SHPRHEC:5.6.2.-
EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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