Gene detail

Detailed information of XP_020631472.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_773:942713...950466
NR annotation: XP_020631472.1, ras-like GTP-binding protein RHO [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020775813.1

GAATTAAAAGTTaagtgtttgatttattttgcaGATTGTGGGTTACGACATGACAGCTATTAGGAAAAAGCTGGTTATCGTGGGTGATGGTGCCTGTGGAAAAACATGCCTTCTCATCGTGTTCTCCAAAGATCAGTTTCCTGAAGTTTATGTGCCCACAGTTTTTGAGAATTATGTGGCCGACATAGAAGTCGAAGGCAAGACGGTAGAGCTAGCATTATGGGATACAGCAGGACAAGAAGATTACGACAGGCTACGACCTCTCTCCTATCCCGACACTGATGTTATTCTGATGTGCTTCTCCATTGATAGTCCTGACAGTTTAGAGAACATCCCTGAAAAATGGACTCCGGAAGTTAAGCATTTCTGCCCAAATGTACCGATCATTTTGGTTGGTAACAAGAAAGATCTGAGAAATGATGAAAACACAAAGAGAGAGTTAATAAAGATGAAGCAAGAGCCTGTTAAGTTTGAAGAAGCCAAGTCAATTTGTGAAAAGATCAATGGCTATGATTATTTGGAATGCTCTGCTAAAACAAAGGAAGGCGTAAGAGATGTATTTAAAACAGCCACAACAGCTGCACTTCAGGTAGAGCTAGCATTATGGGATACAGCAGGACAAGAAGATTATGACAGGCTACGACCTCTCTCCTATCCCGACACTGATGTTATTCTGATGTGCTTCTCCATTGATAGTCCTGACAGTTTAGAGAACATCCCTGAAAAATGGACTCCGGAAGTTAAGCATTTCTGCCCAAATGTACCGATCATTTTGGTTGGTAACAAGAAAGATCTGAGAAATGATGAAAACACAAAGAGAGAGTTAATAAAGATGAAGCAAGAGCCTGTTAAGTTTGAAGAAGCCAAGTCAATTTGTGAAAAGATCAATGGCTATGATTATTTGGAATGCTCTGCTAAAACAAAGGAAGGCGTAAGAGATGTATTTAAAACAGCCACAACAGCTGCACTTCAGACCAAGAAACGGAAAAAGAAGAAGGGATGCAGTATATTGTAAAATGGTTGAACTTGTTCTGCAGAACTTTGCTTTAAATAATGTGATATGCTAGAGCTCACTAACTTACATGGAAGGAACTTCTCCCACTCTGTTTGGGGTGGGCCAATCCGATGTAAAAGAGAACTTCTTTCTGAAACAGAAAGGAGATGTCCGTAGTAATCATTTATTAATTTGAATTATTAGTATTGTTACATAACCATGCACTGGTCTACCTGTATGGCATATTCTGATGGTGAGATTGCATATCATTGTATTTCTATTCGCTGTGAGGCAGCAGGTTTCATTGTAAGTTAGGATACATAGCCAGGTGTGGTGATGCAATGATGTTTATTAATTGACAAGTGTATAAAAAAAACTTGCCTTTCTCTTTAAAGTGAATTAATGTTATTGGCCCTTCTGTGTTTTTGGCCAATAGGCTTTTTGCATGATGTGATCTCTCGGGACGAAATCCAGTTTTTCAGATCACTAAGTATTAACTGGTATGTCGAAAACAACGGAAACTAAGGTTGATTGGTGCAAGATTGGATTGTAagacttaaaggagctatgtcaccaCTTGTCGAGTTTGTTTTTTATGATCAATGAAATTGCCTTTGAATTGAAGGGAAGTTTACAAAGGTAGCGAAACATCAATGATAGAGTAATCTAAACAAGAACAAAGAGCATCAAACAGAGAGACACTGCAAGCTacaaacttggaaaattaaTGCCAATGTGTAATTTGATTTAAGACATAGCTCCTTTATGTTTTTGTGGTGCACCATTGCTGATCTTGTAGCATGAGATCAGGTCATTCAAAGAGCTCATGTGACCTCTCAAGAAATAAGTAGAATATTGAATAACCGACAATGTGTGTAAGTGATTGTCTCTCAGCAACAGATTTTGATTGTCTTTAGCTAGATAAAAACTACTGTTATAAAATAGTTTTTGTAGGAGAATTTTTGTATGTGTTGATGTTCTTCTTGGACTGGAGTGGTTTGAAAATCCGATGTTTCCAGTGTTTGTACAAGAAATAGTATGTGCTAATTATTGCTAGTTTcatcaaaataatgatatattttctttggagTTTCAGACCTTTTCCAGGGCATAAAAGTTGTTTTCCTCAAGAATGGTGTAGAATTTGGGAGGTTTTGCACATAATGAACTAATGGCTTCACTTATGTGCAGCTCCAAATTTGATTGCTtggtaaatttttaaaacgtttgaTTTGTGTATGTAATATGCAATGTAATAAAATGCTGTTGATTCAAAGGCTGTAATTCGTGAATGGAGATACTCTTTTCGGTTTGTCCAGTAAAGTaataaaacttgttattttgaaaCGTTGTGAAA

Protein

Uniprot

Uniprot term	Description
P01122	Ras-like GTP-binding protein RHO OS=Aplysia californica OX=6500 GN=RHO PE=2 SV=1
P48148	Ras-like GTP-binding protein Rho1 OS=Drosophila melanogaster OX=7227 GN=Rho1 PE=1 SV=1
Q9PSX7	Rho-related GTP-binding protein RhoC OS=Gallus gallus OX=9031 GN=RHOC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806	Family	Small GTPase	Interproscan
IPR003578	Family	Small GTPase Rho	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24072	RHO FAMILY GTPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04513	RHOA; Ras homolog gene family, member A	-	GTP-binding proteins	ko04031	deepkoala