Gene detail

Detailed information of XP_020631689.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_773:3062703...3067759
NR annotation: XP_020631689.1, thioredoxin-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020776030.1

tgactcaaaatacagtgaaagAACTCCTTAAATGGATTGAAGAACGTTGATGAGGTAGGTTAATTccttatttgttttcatttttcttggtAATCTTTTAATTGTAGAACATGCCGGCAAATACATTGTCAGGGCGCTGTATTTGTTGTAATTCTCGGTATAAATCTATGAGACAAGTCATTTTTGGCTGTGGGAAATTGACAGTTAGACGATGAATTCAGTGTTTTATCAACCGTTTGCTATACAGGGCTCATATTGGACTGAATTATtgtattttctcttgatttcttTGCGTAGCGGAAACGTCACGAACAGGAACGGACAAGATtgacaatattaaaaatacattgttttaaaaccAATTATCGAAGTGCTGAGTAATTAtgacctattagctggagtcaAATGAATCATCGGTAACTACTTGGAAAACCTGACATCGGTAGATAGCACGATTTATCAACCGACGATGAAGGAACTAAAGAACGTGAAAAAACTTAACGAATTACTCGGAAGCAGTGGAGACAAGCTGGTCGTGATCGACTTCTTTGCAGATTGGTGCGGTCCTTGTCGGGTGATGGGACCCAAATTTGAGAAATTGGCCTCGGAGTACCCGGGTGTAGTTTTTGCGAAAGTAAACATTGAAAAAGCTAAGGAACTCGCCAACCTGTACGCGATCTCTTCCATTCCacatttcaagttttttaagaACAAACAGGAGGTGGATGACGTCAGAGGAGCGAATGAAACAAGCCTGAAAGAGAAGATCGAGAAGTGGCAATAGCAATATCAACGATGATGATATAAAATGTGCTGTGATAATTTAATTATGAATCCATCTCAGTCTATCAAAATCTTAATAATCCCCTCCATTTTTGGTTTATCATAAACTCTGGTGTGTTGCTACTTTggtaaactttgattttgacttttcCTTCGATCATTCCATACATTCCTGATTTACCGTCGATCCTGTATGCCTAGTTATAATAGAAGaactaaattattttattatttacccCTCCCCTGCCCCTTTATGATCGACTTCGCAAATTAGGACATGGGGAAAGGGACTGGAAACGAGCCATGCATAGCGCACATGACCAACTTGGACGCATGCACAGAGGAACTCATGGAGCAAAGAACTCGTATTTTCTCAGAGTATTTTCTCCAGTAAGTTGAGTTTCTCGGAATTATATTTTAAGGAGTCAAATGTTGTTAAGTCGGAGTTTCTACAGTCCATACAACACTGACGTTCTTAGTGAAGCTGACTTTTCCCATGCGTCTCTCAACAAGACAAgctggatgaaaaaaaaaaatactattccTTAAATTTGGCATCCACATGCGAATGGCAAAATGACCTGAATGTAAAACAGAGATAAAGACAGCCGTCTTGAATAATCCATATTATCTGAAATTATTATTCTTGGAAAATAGTTTTGATGAGTATCACGAAAATTTTGACATTACAATAACAATGGTGAAGGTAATAATGAAAATGCTAAAAAATATTATGAAGGTAGATTGAACCTTTAATTTAAGCAGCTGACTGCACTTTCTAGGGTTTTATAGATTAAATACGCGATAAGGCTCACAGCGTTTATCGCAATTTTTCAGGGTTGGCCATGGGGGTAGTGGTATGCTAATgtacctgaaaagaaaaaccattaTACCCAAAATTTCCCTCGAATTCATGCAAATATCACAATTTggaaaaaacaaggaaaactttATTCCCACAAGAGGCCCAATTCTGGCGTCAAAATACCGTACACTCGATTTAAAATCCCCTGTATGCACAAAACCCTGGCCGACCCTGACCTTGAATTCACCGCAGGctattattttgctttaatttcctCTCCTTCGGCTCTATAGATATTGTTGTAATTGTTCCAACATCTTGATCTTTTATTTATCTGCATCCCGGCAACTGGGTTTGGTTTATCTACTTTAATTGTGACTGAGAAGCAATATCGAGTTCCTGTGTTCCGTACTAAACATCAGATACGTCAGATAATTAATGCACGGAATAAACCGATAACAATAAAGTGAAGAAAATCA

Protein

Uniprot

Uniprot term	Description
Q5WNE3	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae OX=6238 GN=png-1 PE=3 SV=1
O96952	Thioredoxin OS=Geodia cydonium OX=6047 GN=THIO PE=3 SV=1
Q9DGI3	Thioredoxin OS=Ictalurus punctatus OX=7998 GN=txn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085	Thioredoxin	Thioredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005746	Family	Thioredoxin	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR013766	Domain	Thioredoxin domain	Interproscan
IPR017937	Conserved_site	Thioredoxin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46115	THIOREDOXIN-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03671	TXN, trxA; thioredoxin	-	Chaperones and folding catalysts	ko03110	deepkoala