Gene detail

Detailed information of XP_020632234.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_813:2424672...2430110
NR annotation: XP_020632234.1, betaine--homocysteine S-methyltransferase 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020776575.1

ATGTCAAATAGTGAGAAGCTACAATTGACCTATAGTTTCTGTCAGTTAACATTGTTTTCCGACCATTCCCTGTTTCAGCGTGGTATACTGGAGCGGCTTAACGCCGGTGAGGTTTTAGTAGGAGATGGGGGACTGTGCTATGCTTTGGAAAAGCGCGGATATGTGAAAGCAGGACCTTGGACTCCTGAGTGTACGGTGGAGCACCCAGAGGCATGGAAATATCGACGTCATCAGTCTGTATGTTTGGCACGATCCATTATTCTAGCCAATTTATTACTCACTTGTTTAGCTCTGGAGCCTCGTACACTAACTCGTTGGGATGTGCATAAGTACGCTCGGCGGGCCTATGATATGGGAGTGAGGTATATCGGAGGCTGCTGTGGCTTTGAACCATACCACATCCGGGCTATTGCTGAAGAGCTTGCTCCAGAACGAGGAAGATTTCCTGCAGCTAGTGAAAAGCACAGTCCCTGGGGAGAGGCTCTCAAACACCGCGCAGTAGCTGAAGTCCGAGCAGGTAAGACTGGGGAGAGCTCTAAAGACTTCCAAACAACTTGGTTTAAACTTGAATTagccAATCGCGCCTACTGGGAGAATCTAAAACCAGCCAGCGGTCGTCCATTCTGCCCTTCGCTAAGTAGACCTGGACCACGCAGCCAACTGCAATGAACCAAACGAACCTTGCGAATTTTGcattataatttattactgATGTGGAAAAACGAAGACAACCTTATAAACCaactatataaatattttcctcAATTTTCTAAACTTACTAGTCCTCCATCTCCTCCTAACACCTCGCCATCATTAAGCTGCTCCAATCCAAGATGCTGCGCTAGAGAACGTTATAACATGGTTAAATTGATTTTCAAGAGTGATGACGAGGAGACAGCTCGGGTTGAAGATAACCGGGATATCTTactaaacgaaaaaacaaacaaacaaaacaaaacatgagtttttatttgtttttcgaCCTCGCCAGGAACCTGTTCACAAGCTAAGGGTCAGTACTATCCCACCGAatcggaaaaacaaaatatcgtAAATAAAAATACTAGCCCTCAGGCAGGCAGATAAACTGAATATTTTTTGGACAATTCTCAATACCCAAGCGTGGATGAAATTGAACTAAGCTGACAAGTAACGTAACAACTGTAACACAAAACGAATAGAAAACAATCTTGATCATTGATGCCTGACATCAAGGTACTTAAACGATCCAGTGGCAAATGCAATCAAGGATTCACATGCCATCATTATGTAAAATTGAGAACAAAGTCTACAACATGCTTCATTTCGCACTAGTCCAAGGCAAGATCATTTTCGCGGTAGAAATAAAAGTACAGTCAAGCCTCCACTATTGGCCACCTGTCTACAACGGTCACTTTTTTGTCACGGCGGACGGCCCATACATTCAGTCTTATTCAGTTACCTCTCTACAACGTACGACCACCTCTGCACAACAGCAGCGGCCACTGAAGCGCGTCTAAAACACCTCTCGACAATTTTCGCGGCAGAACTAAAAGTAGAGATAGATAATGGCGCGTGTAAGTCAGTGCCAGTTTTAAGCTATGAGAAGTTAGTTACCCTCCAGAAATAAATGTTGTTCAAGGATCGTTTCTTTAAAGccactattttttttatcttgtttagcCCTTTTATCGGTGAGGAACATCCATGTGCTTATTTCAGCGATAAGAACACGGCTTTTGATGTAACGCGACCTTGCTGTTTCGCATAATCGAGTCGCAACCGATGGCTTTCATGAAAAAATCTACGATTACACTGAAGATTTTTCTCAGCTACCGTTCGAGCAGAGTCGCTTCGATCTTATCCGCAGCCTATTGTGATTTTTCGTCCAAACACGTGCACTCGATCTAGCGGCGCTGAGTTGCGTAAAGCAAACTAGCTTGATCTTCAGGCGACAGGAAAAACATGTTGGGCAACCTTTATAGGTTTACAAGGTAGAGTGGCTCAATCGAGAATGGGTATCCATCGGAGCAATGCAGTTCACGTACGGTCTAGCACAGCTGTTCTTGTACGTAATGTAGTATGCAGGAAAAGTCATTCGAGATTGACCTTTAAAAGAACTAAACAATAAGAATTCACAAGGTTTGTAACGAAGTCAGTAAACTAACTCGTATAACTAGAATAACCCGTAAGTCACACATGTCCCGCAAAGGTTACCTCATGTCAATCATCATTGACTGGGGAATCTACGGGTCTGCTCAGAgcactttgattgtttttactgtaatttgagtgcgtttgtaTCCTGattgcatgcatgcatgcatgattGCATTCGgacattgtgtaattttttcgggcaagatGGTCACCGTCCCCCCTCACCCACTAAGTTCAAAGGTGCCCTTACACAGCTGCAAATAATCTGCACTTACCTTTTCAGTTTTAGACACTATGCGGCAGTCCAAATATTCCTAAACACCGAGGTTAATCCTGGATATCTACAGGCTCTGGGGTGTAGTAAAATCCTCGACGGAAAGCTTGCGCCCCTGGCTTGCGCAACTTATTGCAGactggg

Protein

Uniprot

Uniprot term	Description
Q5XGM3	Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis OX=8355 GN=bhmt PE=2 SV=1
Q91WS4	S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Mus musculus OX=10090 GN=Bhmt2 PE=1 SV=2
Q5M8Z0	Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=bhmt PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02574	S-methyl_trans	Homocysteine S-methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051524	Family	Betaine-homocysteine S-methyltransferase	Interproscan
IPR003726	Domain	Homocysteine-binding domain	Interproscan
IPR036589	Homologous_superfamily	Homocysteine-binding domain superfamily	Interproscan
IPR017226	Family	Betaine-homocysteine S-methyltransferase, BHMT	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46120	BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009086	Biological Process	methionine biosynthetic process	Interproscan
GO:0047150	Molecular Function	betaine-homocysteine S-methyltransferase activity	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan