Gene detail

Detailed information of XP_020632577.1 in Orbicella faveolata

Genomic Location: Sc7jCM8_847:8...42180
NR annotation: XP_020632577.1, uncharacterized protein LOC110069390 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_020776918.1

aTTTACATATCGAAAGTGGTTCAATGGACGAAACAACATCCTGAAGCAGCTGATTTAGAAGCGGAAACAGCGTCCTTGTATCcgcaaatttgtcaaaaataacgGACGAGGGTATCAAAACGTGTTACGTAAAGCCAGAGCCAAGAGGAGGAGCAAATCGCCATTCTTAAAGGTCTACAAGACTTCGATGGTTCGACTCGTTGGAACGTTAACTTAAGACTGAAGTACAATATGGCCACCGCCCCAGACCCAGATGAGGTGCTGCGTTCGACAAAACGAAAGGAAAATCTTCAACGTATTTCACGACTGTTGATAAGCGGAGGGACTACACTACTGAGagagatttttgatttgatttttccACCAAGCAATCTTCCCGCAATACTGAAAAATCCAGCCACAGAGAAACAACTCAGATCAGCAAAGCTTACCAAGCCACAGTGGGACTGTCTGTACCCTTCCCCAGGGGTGTATGGCAAATCGGCAGATTTTGACGTTACCTTGCTGTTCAGGTTGCTAAGGACAATATGCAATCTCACCCCTCCTACCACAGGATGGGATGCCTTGCCAACAAGTACAGATCACAGTTTAGCTGCAGATTTGGCAAGAATTAAATATTACCGAAACACGGTGTACGGTCACGTAAACCAAAGCATGGAAATTACAGATGACGAGTTTCTACCACTTTGGCAAGATCTCAGCGAGGCTCTTGTTAGAATTGCGGGTCAGATCAGTCCATCAAAGAAACGTGGATGGCAAATGGCCATTTTGGACTTTTTGAGGAATCCCCTTACAGCAGAGGATGAAAGAAATGCCCAGGAACTGCGGGAGTGGTACAGAAACGATATAGAAGTAAAGGAATTCATAGCGGAGCTGAAGTCTACAACTAAAGAAATGCAAGATAGCATGGAACGTTTGGAGACTAGTTTGAAAGTTGTCGATCGAGGGATAGAAGATAATACACAGCTACTAGAAGAGAAAGTTGGGGGCTTAGAAACAACAGTTAGAGAGGAAGCCCAGGATATCAAAGATCAACTGGGAGAGATGCGTCAATCCATGGACAGGCTCAGCTCCTTCGTTGGTGTTTCTCAAACAACGGCAGCTCGTGTTCGACTGCAAATTGATTGCGAAACAATCTCAGGTCCTGGTCCACAAGGAGGATCGACTTCAGACATAGAAGTGGCCTCACAGGAACAAGAACCAGGGCTACCGGTCCAAGGAATGAGCATGATACCTATCACATCACATATGCGAAAGGCAGACCCTAGGTTTCCCACAGCGCAGCAAATTCTAAACCTCGCGGCCTCAAAATACTTGGAAACAATTGACCCATCCAAACCAGAGGAATTAAATGGCTTGGTTTATTACTTGCAAGAAGTACGAAACGTCTTGATTGTGGATACTCATTCAGGGAGTTTGATCATCACAGTCGAGTGTCGCTCTCTGGAAATACTTGACGAATTGTGGTACGATTATTGCAATGGTGTTCTGAATGAAATGGTGCAAAAATTCCTTGTGACAGAGGAGGTTCTAAAGGAAGTTGGCGTCATTGAAGTGAAGCTCACAACAACCATTTTAGAGGAGGACTACAGGGCTTGTCGAGAGTATTTGCTGCAGCATTCAGTAGCCATATCGCATGATTCAAAGCATGGCAAAGTTGACCCACGAAGACGAAGAAACGATGGTGAACCAAGTTGGTATGATAAAGCTGTTAATATGGATTACCAAGAAGAGGTAATGCAGATCCCGAAGGACAAGGTGGGACTTATTATAGGAACAAGGGGacggagaaagaaagaaataatggaaaaaagtGGAGTTAAAAAGTTCATCATCAGAGAAGACCAAGTCCACTTAGGAGGAAGAGAAGAACAGCGCGCCAACGCAAAAAGAATTATCGACATGATTTTAAAGATCAACTGAAGATAGCTGTTATAGCTGTTCCGAGAGACTTGATGGGTTTTGTGATCGGAAAAAACGGAAGttcaataaaagaaatacaaattgaGTCCGGAGCTAAGCTCAATTCAGACAGCGATCAAAGAGGATTTTTGGTCAGCGGAAATAACGAGGAACGAGCATGCGCAAGGGAACTCGTTCAACAAAAAGTCGTGAGTGCCAATCTTCGTTCCTTACTGCTCAAGCTTGACGAAACGAGCGACTCTCGTGAGTTCCGTTACAGgcttcattttgtttggttgaaAACGATGAAAATGACGTAAGTCCGATATTTTTGGACATCCAAATCCTTCCAAGCGGAACTTTCTAAGGTCGCTCGTTTACCGATtgctggtcaaggggaatgAAGACTCTGGGTACGAACCCTAGGTTGTACATAACTGAAACGTTAGGGTGGAGAGACCTCGACAAACAAATTGCCAATACGCAATTTCCGAGTTACTCTTACTGCTGTTGCAAGACGAGTCTTGGTTCACAACCTTTCATATTTTAATGAGTTTTGCATGCATGgtcattgtcttgcaaatcaaactcatttcca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46844	SLR5058 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11236	CDC24; cell division control protein 24	-	MAPK signaling pathway - yeast	ko04011	deepkoala