Gene detail

Detailed information of XP_028390688.1 in Dendronephthya gigantea

Genomic Location: NW_021163014.1:2132162...2142685
NR annotation: XP_028390688.1, fibroblast growth factor receptor 1-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028390688.1

ATGAACTTAGCCGTTGTATATTCCACATTATTTTTGGCAGTACTAATTGACGGGAAAAGTTTTCCAAAATGCTCAAACACAGTTCCGCTTAATAAAAACATATTCGGCACAGTTGCCTTCAAACCAGGCGATATAGTGCTTCCGGGAACAAACATGACTGTTCTTTGCGTCGGAACTGAGGGAAAAGCACCGATAACGTCGAGACAGGCTGATTATGAAATTGCTCGGATCGACATCTTTGGTCCAGATGGTGGTCATCTGCGCAGATGTACCGTAGATTTCAATAAACTTCAAGCTTGTCATTATATTATAAATGGAGTGAAAAACCTTGGTAACTTTCAATACAGCTGTGCATTCGTTGCACGGAACAGTGCGTTTAGTTGTCTTGCAGAGAAGAATTTGTCAGTCGTTGAAAACGTTTGCCAAGCAAAACCATGCGACAAGAATGCTATTTGTAAGAACACGGCAACTTCATTTGAATGCAAATGTAAACAAGGATTCAATGGAGATGGAAAAAACTGCACAGCTAACAGAGGGTGTAACTCAACTCCATCACCATGCCATGAAAACGCAATTTGTGAGAATACGATTAATTCATTCCAGTGCAAATGTGTGCCTGGCTTTACAGGAGATGGCAAGATTTGTACAGAACTACGGCAGTGTGGCGTCAATTCTGTTTGCAATACCAAAGACGATCCTGTAAATTGCCTGCTGCTAAATCAAACAGTTCGCTGTAAATGCAATGGAAATTTAATTGGAAATGGAACGCATTGCTTGGAACCAGTGAATAATATTCCAAATGCTTTCAGCAGTAAAGGCAATACAACTAAAGTCATTATCGCTGTCGTTGTTCCAACTTTTGTTTTACTTGCCGGGCTTCTCATTGCTTACTGGCTTTACCGAAAACAAAGAAACGCACGGCAGGAAGAGGTATTCAATAGCCCTATACACGAGTTAAACAAAGCACGAAAAGCCTCTAAAGACAACATGGACATTCTATTTCCTGAACACCCAAAGGATGTAGACAGTTCCCCAAGGAGAAGACTACCATCCATTCACGAACATAACAGTAAAGAAGAAAAAGAGGAAGAAGAAATCATGTCCTACATTTGTGTTTTGGACGACTGGGAAATCAAAAAGGATGATCTGACAATTCTAAATAAGAAGTTGGGTGGAGGATGTTTTGGTGTTGTGAAGAAGGGACTGTACACAAAGAAAGAGAACGATAGAGAATTTGTGGCTGTTAAAATGCTAAAAGACGCACCATCGGCGGCAGACCGCTCGGATCTCTTAATGGAGCTATTTATTTTGAAAGAAGTTAACAAAACTCCACATGAAAATGTCATAAAACTTATTGGGGCGTATACCAGCGCAGAACCTATCCTGGTATTAACGGAGTTTTGCTCACGTGGGAATCTGCGGTATCTACTAAAAAATAGTCGAGTGTCAGTGACTGATGACAATAACGAAGACATATCACAATACAAAAATGTTTTTTCAACATTAAGCCACAGAAAACTACTTCAGATTGCTGTTGATATAGCATGTGGAATGAAACATTTGGCTGCAAGTCAGTTTGTTCATAGGGATCTCGCAGCAAGGAACATTCTCATTTCAGCCAACTATGAGGCGAAAGTGTCTGATTTCGGTTTGGCCAGGCCGATCACTGGGGTCGAACAAATGTATGTCAAGTCAAACAGAAATTTATTACCGGTGAAATGGATGGCAGTTGAATCACTTACACAAGGAATATTTCGAACTTCAAGTGATATGTGGGCATACGGTATTGTACTCTGGGAAATCACAACATTAGGGAAGGAGCCGTACCCCGATATCTCCCCTTTCGATACATTCACCTTTGTCACATCAGGAAATCGTATGGAGCGACCTCCTCATTGCTCAGAAGAACTGTATGGCATAATGAGAAAATGTTGGGAACACGATCAGAAAGACAGGCCATCATTTGAAGAAGTCCATGAAGAAGTCAAGGAAATGTTGGATGAGACCGATGACCGAATGTATATAAATGTTATTGAGATGGACGAGGAAAGTCGCAAAGAATTGACTGTTCTTGAAGATCGCAGGATCAGTGTTGAAAGTATGAAAGACTTACGTTATACCGAAGGATAG

Transcript

Protein

Uniprot

Uniprot term	Description
O42127	Fibroblast growth factor receptor 3 OS=Xenopus laevis OX=8355 GN=fgfr3 PE=2 SV=1
Q91287	Fibroblast growth factor receptor 3 OS=Pleurodeles waltl OX=8319 GN=FGFR3 PE=2 SV=1
Q498D6	Fibroblast growth factor receptor 4 OS=Rattus norvegicus OX=10116 GN=Fgfr4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan