Detailed information of XP_028390950.1 in Dendronephthya gigantea

Genomic Location: NW_021163010.1:4269363...4283660
NR annotation: XP_028390950.1, uncharacterized protein LOC114515803 isoform X5 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
Q6DCQ6von Willebrand factor A domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=vwa2 PE=2 SV=1
Q99715Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00007Cys_knotCystine-knot domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR024731DomainEGF domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR006208DomainGlycoprotein hormone subunit betaInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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