Genomic Location: NW_021163015.1:1293737...1323494
NR annotation: XP_028391336.1, uncharacterized protein LOC114516141 isoform X3 [Dendronephthya gigantea]
| CDS | ||||
| XP_028391336.1 | ||||
| Transcript |
| - |
| Protein |
| XP_028391336.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q6DFV5 | Probable helicase with zinc finger domain OS=Mus musculus OX=10090 GN=Helz PE=1 SV=2 | |||
| Q6NYU2 | Probable helicase with zinc finger domain OS=Danio rerio OX=7955 GN=helz PE=2 SV=1 | |||
| P42694 | Probable helicase with zinc finger domain OS=Homo sapiens OX=9606 GN=HELZ PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR045055 | Family | DNA2/NAM7-like helicase | Interproscan |
| IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10887 | DNA2/NAM7 HELICASE FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0035194 | Biological Process | regulatory ncRNA-mediated post-transcriptional gene silencing | Interproscan |
| GO:0043186 | Cellular Component | P granule | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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