Gene detail

Detailed information of XP_028392243.1 in Dendronephthya gigantea

Genomic Location: NW_021163016.1:2395603...2400704
NR annotation: XP_028392243.1, pachytene checkpoint protein 2 homolog [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
E1C6Q1	Pachytene checkpoint protein 2 homolog OS=Gallus gallus OX=9031 GN=TRIP13 PE=3 SV=1
Q15645	Pachytene checkpoint protein 2 homolog OS=Homo sapiens OX=9606 GN=TRIP13 PE=1 SV=2
Q3UA06	Pachytene checkpoint protein 2 homolog OS=Mus musculus OX=10090 GN=Trip13 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044539	Family	Pachytene checkpoint protein 2-like	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001270	Family	ClpA/B family	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45991	PACHYTENE CHECKPOINT PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0007131	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0051598	Biological Process	meiotic recombination checkpoint signaling	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22399	TRIP13; pachytene checkpoint protein 2	-	Chromosome and associated proteins	ko03036	deepkoala