Gene detail

Detailed information of XP_028392832.1 in Dendronephthya gigantea

Genomic Location: NW_021163017.1:997273...1002729
NR annotation: XP_028392832.1, von Willebrand factor A domain-containing protein 2-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A8TX70	Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1
P15989	Collagen alpha-3(VI) chain OS=Gallus gallus OX=9031 GN=COL6A3 PE=2 SV=2
A2AX52	Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan