Detailed information of XP_028393069.1 in Dendronephthya gigantea

Genomic Location: NW_021163019.1:666201...702829
NR annotation: XP_028393069.1, probable helicase senataxin isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z333Probable helicase senataxin OS=Homo sapiens OX=9606 GN=SETX PE=1 SV=4
A2AKX3Probable helicase senataxin OS=Mus musculus OX=10090 GN=Setx PE=1 SV=1
Q00416Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF12726SEN1_NSEN1 N terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR024481DomainHelicase Sen1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0001147Molecular Functiontranscription termination site sequence-specific DNA bindingInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10706SETX, ALS4, SEN1; ATP-dependent RNA/DNA helicase, senataxinEC:5.6.2.5
EC:5.6.2.3
Transcription machineryko03021deepkoala

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