Gene detail

Detailed information of XP_028394567.1 in Dendronephthya gigantea

Genomic Location: NW_021163022.1:1871185...1873427
NR annotation: XP_028394567.1, LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A0-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8W034	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1
Q9WX39	Putative RNA-binding protein RbpF OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpF PE=3 SV=3
Q44560	Putative RNA-binding protein RbpA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpA PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48033	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12741	HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3	-	Spliceosome	ko03041	deepkoala