Detailed information of XP_028394858.1 in Dendronephthya gigantea

Genomic Location: NW_021163022.1:132280...137504
NR annotation: XP_028394858.1, scavenger receptor cysteine-rich type 1 protein M130-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
Q2VLG6Scavenger receptor cysteine-rich type 1 protein M130 OS=Canis lupus familiaris OX=9615 GN=CD163 PE=2 SV=1
Q2VL90Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa OX=9823 GN=CD163 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050912FamilyLysyl oxidase-like proteinInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004720Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0018057Biological Processpeptidyl-lysine oxidationInterproscan

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