Gene detail

Detailed information of XP_028395565.1 in Dendronephthya gigantea

Genomic Location: NW_021163023.1:2181786...2186431
NR annotation: XP_028395565.1, HMG-box protein STE11-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q04887	Transcription factor SOX-9 OS=Mus musculus OX=10090 GN=Sox9 PE=1 SV=2
F1LYL9	Transcription factor SOX-9 OS=Rattus norvegicus OX=10116 GN=Sox9 PE=1 SV=2
Q9BG91	Transcription factor SOX-9 OS=Callithrix jacchus OX=9483 GN=SOX9 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050917	Family	SOX Transcription Factors	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45803	SOX100B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09270	SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)	-	Transcription factors	ko03000	deepkoala