Gene detail

Detailed information of XP_028396257.1 in Dendronephthya gigantea

Genomic Location: NW_021163025.1:2100278...2104242
NR annotation: XP_028396257.1, sprT-like domain-containing protein Spartan [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
D3ZVU1	DNA-dependent metalloprotease SPRTN OS=Rattus norvegicus OX=10116 GN=Sprtn PE=3 SV=1
G3X912	DNA-dependent metalloprotease SPRTN OS=Mus musculus OX=10090 GN=Sprtn PE=2 SV=1
A0A0G2L7I0	DNA-dependent metalloprotease SPRTN OS=Danio rerio OX=7955 GN=sprtn PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|ZnF\|UBZ

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10263	SprT-like	SprT-like family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044245	Family	SprT-like domain-containing protein Spartan	Interproscan
IPR006642	Domain	Rad18, zinc finger UBZ4-type	Interproscan
IPR006640	Domain	SprT-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21220	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24051	SPRTN; SprT-like domain-contaning protein Spartan	-	DNA repair and recombination proteins	ko03400	deepkoala