Gene detail

Detailed information of XP_028396592.1 in Dendronephthya gigantea

Genomic Location: NW_021163026.1:411231...423176
NR annotation: XP_028396592.1, allene oxide synthase-lipoxygenase protein-like isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028396592.1

ATGCCTTTCGCAGAGCCAGCAGAGGCTAGGCGATATAAAGAACAATTACTTCATGATGTAATTTTTGTTTTAACAGAGTTTTTGATACCATTCTGTTCTACTCTCCTCAAGTTGGTGTTAAGCACGAGGGTCGCGCGGGCGACATTTGTGCAACGGTATCGTGTGGTTCAAGACCAAGTTGGGTCCAAAGGGTATTGTGTTGTTACTGAAACGTCCGTGCCTCCTGAAGATAAGAAGTTTGACGAGCTGGTTGCCATGATCAACGTAATCGCCTGTAAGCAGCAGAAACTAGAGGAATGTTTGACAGCCGCAGTAAACCAGAACGGAGAGCAACAAAAAAGAAACAACTTCCACGCTACATCTGGGAGAAGAAATAGACCACCCATTGTATGTTACAACTGTGGACAGCCTGGGTATCTGGCCAAAGATTGCGGACAAGAGAACAGTGAGAATTTTGGCTACGAAATTTATAAGCAGATCAAGGGGGAAGATGAATTTGAAAAAAAGATGAAAGAAGCGAACACGTTTCGACAGACTGGCATTTTTGATGGCATAAAATTAGCGCTCGAGAAGAATAAGATCAAACTCCTGTTTGGTGTGGCAGCGCTGAGCAGAGGCAAAAGACCAACACATGCTGTTGGTATCGCAGCGCGCGGTGTTGCTACGGTCGTAAACGATCCCCAATTTCCCCCATGCGAGTTTTTTACCCCCGGAAGATCTTTTCCTGTCTGCCTTCGTCATGCGACTCTAAAATCCATCGACGACGCCATGTTGGATTTCCTCAGTGCTTCAATCAGATTTGCCGACAGCGAGGAAGAGAAAAGCCAGCTGGATATCCTCATGTCGACGGGAAGAAGCAACCCTTTGTCCAATGTGAAGGGGATTTACGACGCTGTTGCAGCCAACAAGAGTGGCAACCTCAAAGACTATTATCTCGATAGCCCAGACCGACTTGCGAGCAACATAGATGGTTTGCGGCGAGCACCAGATTCATTTTTCGATCAACGGTATTATTCTGAAATTATCCTGGGATTCAACGCCTCTGACGCTGTGCAGCGCTACGCCAGATTCCGACTGATACCAGAAGATGGCTCTATGGAAACGGGTTTGTTATCTAAAGACAACCAAAGACATATTTGGAAAAACGAAAGACTGCCTTCAGAAATCAGATCCAAAGACTATTTGAAAGAAGAATTCAAACAAAGAATTTTGGCTGGGGCTGTGCGATACAAACTGCAGATGACTCTGCACCAGGCCCAATCTGATGACCCGCCTGGTATTTTGGATATCGCGAAGTACTGGGACGAAACTACCCACGAATGGGTGGACGTAGCTGACGTCACTTTAACAACTCTACTCACTCCGGATACAACGGCTGGGTTGCGGTACAATCCAGGCAATTTGCCTGATTCTCTCTATTTTCTCCCGGCTCGGTCCATTCACGATTCCAATTGCATCGCTCACATTCGAATGGAGGTCTACGCATTCACACAGCAGTTTCGCTACATTCGAAGTTCGAAAATGCAGCCTGATCACGTGGCCACATACACTATTCAGGTGGATGCAGCGGGCCACGCGACCTCAAAAGCTGGCGACAATCACGCTAACATTTCTATATCTCTCACAGGATCGAAGGGGAAAACAGAAAGGCTTTCACTCAATTCTCTGTCGGATGAGGTCAGTTCCGCAAGCGAGTATACATTGCAGGCGATGGATATTGGTGAAGTTCTCATGGTCCATATTTTTAACGACAGTCGCTCTTGGTACAAAGATTGTGATTGGTTCTGCAACAAGATCACAGTTACCAGTTCAAAGTACGAAAAGTCCTTGGAGTTTCCGTGTTACCGATGGGTGGTATCAAATATGGTTATCTTTCAAGCAATGGCCGTACTTCCTTTTCAAGACCAGCCAGAAGCGATCAGACTAGAGCGAGTTCTCGAGTTGCAAGAACGTAAAACGAAATACCGCTGGGGGGAAATGCCTTCGACCGGGAGTGGGGGTTTGCCCGGGTTCGTTCACGCACCACAACACGAAGATATACCCAGAGATTCGCAATTTTCCGTCGAAGCTAGTGTTGCGTTTAATCGTGGCCGCGTGTTCGGAGGAGTAAACCTGGGTCTCTCGTTTGTCTACAACGCTTTTACCAGCTGGGATGATTTCGACTGCTTCAAGAAGATCTTCACAGGTTGGACGGGCGATGTTCCCGAAATCAGCAGGAATGAAATGTGGATGGAGGACAGAATTTTTGGCTATCAGTTCCTGAATGGCTGTAATCCGTGTACCATCAGACGTTGCAATGAACTGCCAGAAAACTTTCCCGTCACAGACAAAATGGTAAAGAATTTTCTCGACCGAGGACAGACATTGACAGAAGAGATTAAGAACGGGCACGTCTACATTGTCGATTACAAGGATCTGGAAGGAATCAAGCGAAATGGCGAAGATGGGTGCTCTGAATTATGTTACGCTGCAGAACCTCTTTGCTTGTTTTACGTGAGAAGTTCTGGAGATTTGATACCCATTGCAATTCAACTTTTTCAACAGCCTGGTGAAACCAACCCGATCTGGACACCCGATGACGCAAAATATGACTGGCTTCTAGCCAAAATGTGGTTCCGCAACGCTGACCACCAAATACATCAGATGGAAATACATCTTCTAAGGACACATTTAGTTATGGAAGCATTTTCTGTCGCCGCGTGGCGTCAGTTGCCATCGATCCATCCAGTGTTTCAGCTTCTCTTTCCGCACCTTCGTTCCGTCATGGCCATTAACACGATTGGAAGAAATGAACTGGTCTCTAAAGGTGGAATTGTCGACAAAACACTTAGCATCGGCGGTGGAGGCCACATTGAACTTTTGGAAAAGACGTACAGTAATTTCATGTTCGAGATGCTGTCTCTCCCTGATATGTTAAAATCTAGAGGTGTGGACGACACTGACAAACTACCAAACTACTACTACAGGGACGATGGACTTCTTTTGTGGGCAGCAATTTCTAATTTCATCGTGGAGTTTCTTAGCATTTTCTACCATTCCGATGATGACGTATACCGCGACCACGAGATACAGTCGTGGGTGGCTGACATACACGATAATGGTCTGCCGACAAGAGAGGGCGATGTTGATCATGGATTTCCATCGTGTCTCCATACACGAGATGAACTGGCGCACGTGTTGACCTGTATTATATTCACGTGTTCATGCCAACACGCAGCAGTTAACTTCCCACAGCTGGAAATCACTGGATTTATCCCAAATGTTCCTCCTGCGATGCGACAGCCACCACCAGCGAAAAAAAACCAGGCAAACTTGCAATCTATCATGGAGACACTTCCCAATAAAAGCCAAGCAGGTTGGCACGTCGGCACTATGTACACACTAACGAGGATTGCAGAGGATGAGCGTTACATTGGAGACTACACGGAAGGTCTTTTGAGCGGCACTGAAATAGAAGGTGTTACATCTCGTTTCCAATCCTCCCTCCTGAATATCTCGAAAGCAATCAGGAAGCGCAATGCATCAGTGGAGTTTCCTTACACATATTTGTTGCCTGAGCGAGTGCCGAACAGCATTGGAATCTAA

Transcript

Protein

Uniprot

Uniprot term	Description
O16025	Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla OX=47982 PE=1 SV=1
P48999	Polyunsaturated fatty acid 5-lipoxygenase OS=Mus musculus OX=10090 GN=Alox5 PE=1 SV=3
P51399	Polyunsaturated fatty acid 5-lipoxygenase OS=Mesocricetus auratus OX=10036 GN=ALOX5 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF00305	Lipoxygenase	Lipoxygenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020834	Conserved_site	Lipoxygenase, conserved site	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR020833	Binding_site	Lipoxygenase, iron binding site	Interproscan
IPR013819	Domain	Lipoxygenase, C-terminal	Interproscan
IPR001885	Family	Lipoxygenase, mammalian	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR000907	Family	Lipoxygenase	Interproscan
IPR036226	Homologous_superfamily	Lipoxigenase, C-terminal domain superfamily	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR020835	Homologous_superfamily	Catalase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11771	LIPOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016702	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0034440	Biological Process	lipid oxidation	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26082	AOS; arachidonate 8-lipoxygenase / allene oxide synthase	EC:1.13.11.40 EC:4.2.1.-	Arachidonic acid metabolism	ko00590	deepkoala