Detailed information of XP_028398110.1 in Dendronephthya gigantea

Genomic Location: NW_021163031.1:1017738...1030104
NR annotation: XP_028398110.1, fat-like cadherin-related tumor suppressor homolog [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60847Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3
Q99715Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2
P13944Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL12A1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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