Detailed information of XP_028398558.1 in Dendronephthya gigantea

Genomic Location: NW_021163032.1:1594337...1599937
NR annotation: XP_028398558.1, microtubule-associated proteins 1A/1B light chain 3C-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9BXW4Microtubule-associated protein 1 light chain 3 gamma OS=Homo sapiens OX=9606 GN=MAP1LC3C PE=1 SV=1
Q2HJ23Microtubule-associated protein 1 light chain 3 alpha OS=Bos taurus OX=9913 GN=MAP1LC3A PE=2 SV=1
Q9H492Microtubule-associated protein 1 light chain 3 alpha OS=Homo sapiens OX=9606 GN=MAP1LC3A PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|ATG8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02991ATG8Autophagy protein Atg8 ubiquitin likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004241FamilyAutophagy protein Atg8 ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan

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