Detailed information of XP_028399610.1 in Dendronephthya gigantea

Genomic Location: NW_021163010.1:2383163...2389473
NR annotation: XP_028399602.1, tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7ZWS1tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus laevis OX=8355 GN=dus3l PE=2 SV=1
Q28BT8tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus tropicalis OX=8364 GN=dus3l PE=2 SV=2
Q96G46tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=DUS3L PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF01207DusDihydrouridine synthase (Dus)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR018517Conserved_sitetRNA-dihydrouridine synthase, conserved siteInterproscan
IPR035587DomainDUS-like, FMN-binding domainInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45846TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0017150Molecular FunctiontRNA dihydrouridine synthase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05544DUS3; tRNA-dihydrouridine synthase 3EC:1.3.1.89
Transfer RNA biogenesisko03016deepkoala

TOP