Detailed information of XP_028399828.1 in Dendronephthya gigantea

Genomic Location: NW_021163036.1:1346684...1350515
NR annotation: XP_028399828.1, DNA-binding protein SMUBP-2-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9EQN5DNA-binding protein SMUBP-2 OS=Rattus norvegicus OX=10116 GN=Ighmbp2 PE=1 SV=1
P38935DNA-binding protein SMUBP-2 OS=Homo sapiens OX=9606 GN=IGHMBP2 PE=1 SV=3
P40694DNA-binding protein SMUBP-2 OS=Mus musculus OX=10090 GN=Ighmbp2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21138SMUBP-2_HCS1_1BHelicase SMUBP-2/HCS1, 1B domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR048761DomainHelicase SMUBP-2/HCS1, 1B domainInterproscan
IPR004483FamilyHelicase SMUBP-2/Hcs1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR050534FamilyCoronaviruses polyprotein 1abInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43788DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043139Molecular Function5'-3' DNA helicase activityInterproscan

TOP