Detailed information of XP_028400202.1 in Dendronephthya gigantea

Genomic Location: NW_021163037.1:383642...396226
NR annotation: XP_028400202.1, collagen alpha-5(VI) chain-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
P12111Collagen alpha-3(VI) chain OS=Homo sapiens OX=9606 GN=COL6A3 PE=1 SV=5
P15989Collagen alpha-3(VI) chain OS=Gallus gallus OX=9031 GN=COL6A3 PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16754PesticinBacterial toxin homologue of phage lysozyme, C-termDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR023347Homologous_superfamilyLysozyme domain superfamilyInterproscan
IPR031922DomainPesticin, C-terminalInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR023346Homologous_superfamilyLysozyme-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003796Molecular Functionlysozyme activityInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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