Detailed information of XP_028400363.1 in Dendronephthya gigantea

Genomic Location: NW_021163038.1:1071738...1076655
NR annotation: XP_028400363.1, F-box/LRR-repeat protein 7-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0893729 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1
P4931431 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1
Q9ZUU4RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP29B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937F-box-likeF-box-likeDomainInterproscan
PF13306LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001810DomainF-box domainInterproscan
IPR026906RepeatBspA-type LRR regionInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR050648FamilyF-box/Leucine-rich repeatInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

TOP