Gene detail

Detailed information of XP_028400812.1 in Dendronephthya gigantea

Genomic Location: NW_021163039.1:1381211...1383694
NR annotation: XP_028400812.1, NACHT, LRR and PYD domains-containing protein 3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028400812.1

ATGAAGTGGCATGAGATCTATGATGTTTATATGAAAGTTTCCGAAAAATCAATTCATCTGAAAGAAATTAAAGAATTATTTTATCCCAACAAGGATACTAAAAACAAAATCCCTTTCACTATTTTGGTAATCGGACGTCCCGGAATTGGAAAAACTGTTCTGACCAGAAAAATCGTGCGAGATTGGGCAAAAGGAGATGATGAAATTTATCACAATAAAATCGCATTTTATTTCAAATTCAGATGGTTCAATCTTGCCCAAAAACAACATGTAACACTTAAGAAATTTCTTCAGATTGGAACAGAACTGCTGAATAAAGATGAATTTGAAAGTATTTTTAAAGAAATTTGGAAAAATCCACGAGTGGCTACTTTCGTTTTTGACGGTTTAGATGAATTTCATGCAAGCCATGGAAGTTTTCAGATAATTCTAGATCAGTCAAGAATGTTTCCCAATGATGATGTTTCTTGTTCCATGTCTGCAATGTTTCTTTTCGTCAAAATCTTGGTTGGCGACATGTTACCAGGGGCAACAGTCTTGGTGACCAGCAGGCCAATTGTGAATGATGTTTTGTGCAAAATGAAATTTGACAGAACTGTTGAAATAGTTGGGTTCACATCAGATAAAATTGAACAGTATGTTAAACAGTTTTGTGCTAATCATAACAGGTGCGATCTAGAAGCAACGCTATTGAGTCATATCAAATCATCATCTGAACTGATGAATTTATGCTACATTCCAGTGAATTGTTTTATTGTGTGCGTCTCTCTGTTCGAATGTCTCGTTGTGTCAGAGGGTGATATTGGTGATCTACCAACCACTTTGACGGAACTGTACGAGTCAGCTTTAGTCTACTTCAATAAGCATCACGACCGAAATGAGAGCAAAGAAGTTGTTTTAAAGAAACTTCAACTGTTGGCTTTCAATGGTATGAAAAACGATGAACTGATTTTCAATGGAGAGCTAGTCGATGAGAAAATGAAAGCGTCAGGATTACTAAACTCTTTACCTAATCCAATTTTTCAAATTCAAATACAGGTTTGCTTTATGCATTTAACTATACAAGAATTTCTCGCAGCAAAGCATATAATGGAAACAAAAACACCTGAAGAAGTAAAAGAATTTATATCTTCGCATATCAAACATGGCAGATGGCATCTCGTGCTTCAGTTTCTGGCTGGATTATTGGGAGTGAAAATGAGAACGTCTGATGATTCTCGTGAATATAGAAGCTGTGTGTTGTCGTTCAAGGAATATCTTGCAATTCAAGGCACTAAGTGCGAAATTCGACCAAATCATATTTTGGTGATGAAATGTTTGAGAGAAGCACAGGATGAAGATGTTAATAAAGAAATTGCTGCAAACTCTGGTTTGAAAGATGCAACGGAGATATTTTGTGATGCTGCTGATGTACGACTTCTTTCCCTAAGCGATGTGGCAGCAATGGTGTTCGTTTGCAAACAGTTGAACTTTTTAAATCATTTATACATTAATGGCGCACCTAGTGATTGTTCAATGGAAGCTCTTAAATTGCTAAATGAAAGATGCATAAAATCACTGTCCATGAACGATTGTCATCTTGGCGAGATGGATTGGAAGCGTTGTCCGGCGCTATTGCAATCTGAATGTCAGCTGAAGCACAGTCATTCTAAGCTTACCAAGCTCTGTTGGCCAAAAAACAATATTAGTGATGCCGGAGTGGCGTATCTAAATGAGTTTCTCAAAAATAGGCATAAAGTCGGTTTGGTGGAATTAGATCTGTCGTTAAATGATATTACTTCGTGTGGAATTTTGACACTTGTGGAATGTCTCAGCAGCAAAGTTTGTAACCAGCTTACAAAACTTGATCTTGGCGGCAATCCTCACATACGTGATGAAGGCGTTCGTATTCTTTGTAACGTAATTCGAGAAAGGCAGTTGAAACTTGAGAAGCTGAATCTATTCGGATGTTCTTTAACCAATGAAAGCATACCATGCCTGGTAAAATGTGGACTAAAGGACTTGACACTTAGCAATAATAAGATAGGAGATGAAGGTATGCGGATCTTGTGCAGTGTTCTTGAACAAGGAACATTTCCTCTCACCAGATTGAACGTTTCCTTTTGTTCGTTAACAGACGAATGCATGCCGAGCTTGTGCCAGGCTCTCGGAGATGAACGATGTAAGCTCACTAAGTTGTATGTAAGCGACAATGGAATCACAGATAAACATTTATCATTACTCTCAGACACTCTGAAACTTCAGAATTGTTGTCTTGAATATTTATATATTGAAGGTGTTATTACTAAAGCGGGTGAAAAGATCCTTAATGAAACCATGCAATCTGATATCTGCGTAGTACGAGCTTTAAAAATTATCTGTATCACACCTTTGCAATAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q96P20	NACHT, LRR and PYD domains-containing protein 3 OS=Homo sapiens OX=9606 GN=NLRP3 PE=1 SV=3
B0FPE9	NACHT, LRR and PYD domains-containing protein 3 OS=Macaca mulatta OX=9544 GN=NLRP3 PE=2 SV=1
D4A523	NACHT, LRR and PYD domains-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Nlrp3 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF05729	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051261	Family	NOD-like receptor (NLR)	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24106	NACHT, LRR AND CARD DOMAINS-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22666	NLRP14, NALP14; NACHT, LRR and PYD domains-containing protein 14	-	Pattern recognition receptors	ko04054	deepkoala