Gene detail

Detailed information of XP_028401270.1 in Dendronephthya gigantea

Genomic Location: NW_021163041.1:1959221...1964013
NR annotation: XP_028401270.1, gamma-butyrobetaine dioxygenase-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0A384XR80	Dioxygenase str8 OS=Strobilurus tenacellus OX=41251 GN=str8 PE=1 SV=1
Q96UB1	Trimethyllysine dioxygenase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cbs-1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003819	Domain	TauD/TfdA-like domain	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00471	BBOX1; gamma-butyrobetaine dioxygenase	EC:1.14.11.1	Lysine degradation	ko00310	deepkoala