Genomic Location: NW_021163044.1:694762...701409
NR annotation: XP_028402296.1, mediator of DNA damage checkpoint protein 1-like [Dendronephthya gigantea]
| CDS | |||||
| XP_028402296.1 | |||||
| Transcript |
| - |
| Protein |
| XP_028402296.1 |
| Uniprot term | Description |
|---|---|
| Q5U2M8 | Mediator of DNA damage checkpoint protein 1 OS=Rattus norvegicus OX=10116 GN=Mdc1 PE=1 SV=2 |
| Q767L8 | Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa OX=9823 GN=MDC1 PE=3 SV=1 |
| Q5PSV9 | Mediator of DNA damage checkpoint protein 1 OS=Mus musculus OX=10090 GN=Mdc1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16770 | RTT107_BRCT_5 | Regulator of Ty1 transposition protein 107 BRCT domain | Domain | Interproscan |
| PF16589 | BRCT_2 | BRCT domain, a BRCA1 C-terminus domain | Family | Interproscan |
| PF00498 | FHA | FHA domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001357 | Domain | BRCT domain | Interproscan |
| IPR000253 | Domain | Forkhead-associated (FHA) domain | Interproscan |
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR008984 | Homologous_superfamily | SMAD/FHA domain superfamily | Interproscan |
| IPR051579 | Family | DNA Damage Response and Transcriptional Regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23196 | PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K20780 | MDC1; mediator of DNA damage checkpoint protein 1 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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