Gene detail

Detailed information of XP_028404544.1 in Dendronephthya gigantea

Genomic Location: NW_021163053.1:1574253...1581856
NR annotation: XP_028404542.1, mitogen-activated protein kinase kinase kinase 1-like isoform X2 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028404544.1

ATGGTTCAATATTGGGAACACAGAGATGCAAAGCAGAAAACTAGTCGAAAGCCTTGTTCCAAAGTTGTGAGGCCACCATCACCCAACTTTAGTACATCAGCATCAAGTGTTGGTGCAAAGCAAGTCAACTACACTGTAGCTTCGTCCCAGAACCTACGTCCATCATCACCACCCCATCGCAGAAAGACTCCATCAAGTTCTCCATCTGGATCACCTGGACCAAGCACACCAAGAAGTGCTTCCCCAACACTTTTATTTGATGTACAACAAATGGCAACTGAAAACCAGCATAGAGTTGAAAAAGCAATGAAAGTTAGACTATATCTGTTACAGCAAACTGGACCAAACTCATTTCTTATTGGGGGAGACTCGCCAAGTCATAAGTTTCGTGTTATGATTGGTCCTCAGACATGCAGTTGTAGCAAAGGTCCATTCTGTGTTCATTTGCTGTTTGTTATGTTACGAGTATTCAAATTGAAGGATAATGATCCACTTCTATGGGAGAAACAGCTTAAAAATTATGAGGTTGAAATGCTGTTCCATAAGTTTCATGCCTCAGTCAGCTCAAGAATAGGAAGTAAAACGAAATCAGTTACTAAAAGTAAACAGACTCCTCGTCGTGGTGTGACAGATTCACATGTTCAACATGGGTCAGCGGGAAGTGGATTGGCAGGGTCATCTCCAAGAAGTGATGAATTTGAAGTTCAGTGTCCAATATGTTTGTTGGAAATGGTAGATGGAGAAAGTCTGACTATCTGTGATGGTTGTAGCAATACCCTTCATCAACACTGTATGGCAATTTGGGCTGCTGAATGTAAGAGGCAGAAAGAGGCTCTGGTTTGTCCTTTATGTCGCAAAATTTGGGCTAATAAAACAAAGAATGTGGGAAAAAATGAAGAAACCAGACCAAGTGTAGTGGAACCTGATTTACCATCTACAACAAGTCAAGTTGATGCCATCCCTCTTGACAATGAATCAATATTACCACATTGTGATCCAATACCATCTGAACACATTGAACATTCCAAACCATGGGTTGAGATGTTTGGTGAAGACTTAGTTTGCTGTTTGTACTCCAAAGAATGGAACTATCGGGAAAAAGGATTACAACATCTTTGCAAAGAAATGAAAAGTATTTTAACAAATGAGAACTCAAGTTTATTTACAGAAAGACTTTTATCAAGTTGTTGTAAGATCATTGCAATGATGTGTGCAGATCCAGTGTATCCTGTTTATGTTCATGCTGTGCGAGCACTACGGGTTCTATTAGCGTACATGTCGTGCCGGTCAACTGCAGAGAAGGGGGTGTTGCAAAGGGAACTTTCACCTGTATTGGAAGCGATTATCATGAAGTGCGCTGATTCGAATCGGAGGGTTAGTTCATTGTCAACAAAGACTCTCGTTGAGTTGTGTAAAGACGAGAGCGGGGACATGGCATTGGGTGCAGCTTTATCGTCTTCTGCAGAGGGCAATCAAAGTCTTGGTGGAATAAACTATGTTTTATCAAGAACAGTTGTTCGCTCACCCGAGAATGTTACGTGGCCTTGGTGGCTTGGTCGTCTGTATCTTTTAGTTAAACTTTTAGAAGAATCTCCGGATTATTTTCGAATTGAAACCGAAACTGTAGATTACAAGAAGGTTTCTATGAGTATAAGACTTCCTTCATCGCCTAATAGATTACCAGAGAACACCAACCAGTGGGAGAATAACTTCTCCCGTCTTATGTTCATAGTTCATTTTGCCATTAAAGCCACAAGCTGTCCGCATAGTAAAGGAAACAAAATAGCTTTGAGAATTTTGACAAGATGTCTCAAGTTGGCTTCAAAAGTTCATAGTGCTTTTATAGAAGTGAAGACCTGTTTGAGTGAGTTGAAAAAAAGTGATAGAAATGCTTTGCAAAGACAGCTTAAGCACAGACAGGCACCACAGAGAGGTGTGTCTGTAGATTCAGCTTACTGCAGTGGCAGTGCTGAGAACACTCAAAATCTACCAGAGACGTCAGCTCACACCGTCAGTCTGTCAGATGGTGATGGTAATTCCCTTGATGGTATTCCAGACTTAAGCAATGATGACGTTGATATTCAAATGTCAGAGTTGGAAAACTTTCGTTCACTTGTTGAATTGGATGATAGTAGCGATCGTTCATTTCCATTGACGCCTCCAGGGTCACCAGGTCAAGACGAAGATAAAAGACAGAATGCATTATCACCGAGTCTACCTCCTATAGACGTGCCACTTACCACGACGAAATGTCAAAAGAAGATCGAAGAAGAGGAGGCGGAAGCTTTAGCGATCGCAATTGAGGCATCAACTCTGCAACCGTTGGTTCCGCCTCCAATCGAGAAACTTGTTGCTGACGATAGCGAGGAGATTGTTGTTCGAGTACAGCCTGAGAAGGGTGATGAAGCGGATGGAAAAGACAGTAATGATAAACATGTGTACTTAGAGGGTGTTCATTGGACAAAGACGGAATTATTGGGAACTGGCGCGTTTTCATCTTGTTATGCCGCCCGTGATAAAAGCCGTGGAACTCTAATGGCAGTTAAACAGGTTTCATTCTGTCGAAATTCCTCAGACGAACAACAGAAAGTTACAGATACAATAATGGAGGAGATATCGATCATGTCAAAAGTCCAGCATCCAAACCTGACAACATGTCTTGGTGTTACTCGCCATGCTGGGCACTTCAATATTTTCTTAGAATGGATGGCAGGTGGATCCCTAGCCAAACTGCTATCAACTCATGGGCCTTTAGAAGAAAAGGTTGCCGTAAGCTATACTCAGCAAATAACCCGAGGAGTGGCTTACCTTCATGAACATCATGTTATACATCGGGATATAAAAGGGGCCAACATTTTACTTGATTCTACTGGTCATGTGGTTAAAGTGGCAGATTTTGGAGCTGTCGCTCGGCTGAAAACTGAGAAGACATTTTCTGGAGAATTCCAAGGCCAGTTGCTAGGAACGATTGCATTTATGGCCCCAGAAGTGTTACGAGGTGAAAGTTACGGTCGTAAATGTGACGTATGGAGTATTGGTTGTGTTGTGATTGAAATGATGACTGGTAAACCACCGTGGAATGCTAACCAACATTCCAACCATCTCGCCTTGATTTTCAAGATTGCTTGCTCAAGAGGACCACCAGACATTCCTGATGGAGTTAATCCAGGTTTCCGAGACCTGATATTAAGATGTTTAGATACAAATCCTCAAGAGCGCTCTGCAGCTGTTGAACTTTTGAAGCATCCTGTCTTCACGAGAGTCTGCAGATGA

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P53349	Mitogen-activated protein kinase kinase kinase 1 OS=Mus musculus OX=10090 GN=Map3k1 PE=1 SV=3
Q13233	Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens OX=9606 GN=MAP3K1 PE=1 SV=4
Q62925	Mitogen-activated protein kinase kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map3k1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21040	CEP104-like_TOG	Centrosomal protein CEP104-like, TOG domain	Repeat	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF04434	SWIM	SWIM zinc finger	Domain	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050538	Family	Mitogen-activated protein kinase kinase kinase	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04416	MAP3K1, MEKK1; mitogen-activated protein kinase kinase kinase 1	EC:2.7.11.25	Ubiquitin system	ko04121	deepkoala