Detailed information of XP_028404639.1 in Dendronephthya gigantea

Genomic Location: NW_021163053.1:689552...695315
NR annotation: XP_028404638.1, UV excision repair protein RAD23 homolog B-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q4KMA2UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1
P54728UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2
P54726UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF09280XPC-bindingXPC-binding domainDomainInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR004806FamilyUV excision repair protein Rad23Interproscan
IPR015360DomainXPC-binding domainInterproscan
IPR041811DomainRAD23A/RAD23B, UBA1 domainInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR006636DomainHeat shock chaperonin-bindingInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036353Homologous_superfamilyXPC-binding domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10621UV EXCISION REPAIR PROTEIN RAD23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10839RAD23, HR23; UV excision repair protein RAD23-DNA repair and recombination proteinsko03400deepkoala

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