Detailed information of XP_028406007.1 in Dendronephthya gigantea

Genomic Location: NW_021163060.1:1424868...1433411
NR annotation: XP_028406007.1, PHD finger protein 20-like protein 1 isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q4V9H5PHD finger protein 20-like protein 1 OS=Rattus norvegicus OX=10116 GN=Phf20l1 PE=1 SV=2
A8MW92PHD finger protein 20-like protein 1 OS=Homo sapiens OX=9606 GN=PHF20L1 PE=1 SV=2
Q8CCJ9PHD finger protein 20-like protein 1 OS=Mus musculus OX=10090 GN=Phf20l1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20826PHD_5PhD finger domainDomainInterproscan
PF02820MBTmbt repeatDomainInterproscan
PF18104Tudor_2Jumonji domain-containing protein 2A Tudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR002999DomainTudor domainInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR043449FamilyPHD finger protein 20-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR040477DomainLysine-specific demethylase 4-like, Tudor domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15856PHD FINGER PROTEIN 20-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0044545Cellular ComponentNSL complexInterproscan

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