Detailed information of XP_028406076.1 in Dendronephthya gigantea

Genomic Location: NW_021163060.1:1293661...1296744
NR annotation: XP_028406076.1, polyadenylate-binding protein 4-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P29341Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2
Q9EPH8Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1
P20965Polyadenylate-binding protein 1-A OS=Xenopus laevis OX=8355 GN=pabpc1-a PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR006515FamilyPolyadenylate binding protein, human types 1, 2, 3, 4Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR034364DomainPABP, RNA recognition motif 1Interproscan
IPR045305DomainPABP, RNA recognition motif 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24012RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0008266Molecular Functionpoly(U) RNA bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13126PABPC; polyadenylate-binding protein-Spliceosomeko03041deepkoala

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