Gene detail

Detailed information of XP_028406464.1 in Dendronephthya gigantea

Genomic Location: NW_021163062.1:1323698...1343630
NR annotation: XP_028406464.1, uncharacterized protein LOC114528954 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028406464.1

ATGAACAAAATAGTAGGTTTAAGAATAACCATGATGTCCATTTCGTGGATATTTGCTGTGATCTTATGCTTCGTTGTCTTGAGAGTGCATGGCCATGGGAAAATAAAAGTTACAACGGAATCTAAACTTGGCCCATGCAATGAAAGAAATTTTGGGGAATTAATTTTGGTCAATGATCGTAAAGGAAAGAACACTTTATTGGTCTGCAGTGAAGTTGAAGGAAAATTTGGATGGAGTACAACAAACGATGATGGTCAGACTGGAGAAATATCTAATCCAGGACACGATTGCATGTCAATATTGGATGTTAATCCTGAAGCCAAAGATGGATTTTACTGGATAACACTGAACAACAGAAAACCAAAGAAGGCTTGGTGTGACATGAAAACTGATGGTGGAGGATATATTCTTATCGGTAGAACGAATAGTTCCGGCATATGGGCAGTTCCATCTAATGACGATGCAGTTGAACCATTTGGCAAACCCCACTGGTGTAGCGCGCTGGGAAACACTGATGTTATTGATTTCAGAGTTCAGATGGCTTCCGAAGAGGATTTTCAAAAGACGAAGGCGCATTGGGCTTACAGATTCAAAACTCCGCGCAAGTTAAAGAATCTTATGATAAACAAAGGTGGTTGTTCAAGCTTTTCCCCGGGCATTGGAAATGTGAAATACGTGAAAAACTTAGAAACTGGACATACAGTTACCACTCAATTTCGATGTTCAAAGTTTGGTATTGGTTATCATCCCTATACGAAAATTGGTTGGACAATGATGAATTCATGTCTTGAAAAACCATGTCCGTATGGATTTGCATTTCACCGGAGATATCCCATTCAGCAAGACTATTCAGGATCGTTCAGTTATAGTGCAACAAAGAACATTTCCGGAATCGAATACGGAGCAACGGCCCAAGTTGGGTGCAGCCGAGGACATTGTTGTGGTTGCCACGGACCTTCAAGAGGTAAACGGAACTATTGTTTTGAAAAATGCAAAGCTCAAAATGGTGGAACAATTGAATCACACATTTACTCTTGGTTTTGGGTGAGGACGTCTTCCCACAAGAAATTTTGGACCAAATGCATTGATTACAAAATGAAGGAAAACGACACTTTTGTGTGGTATAAGTTAATCGGAAACAGTGAATCGCCGATCGAGGGTCGGTGCGATACAACAGGAAAAGCACTCTTGTACGGTGGGATGCTGGTTATTCCAGATAATACGACGGCAGCAAAAACTCCTGTAATCGATGGTATGATTGTGTATCGTCAGGACACGGAGAAAGTTTATGTAACAAAACATGAGAAACTACACCCTTTAGCAGAAGAAGAAGAGGTACTTGAGATAAAAGAGGAGCTTAACAAATCTCTTGAGAAAAATGAGAAATTACTCAGGAAATTTGAAACACTATGGAAAGCGTTAAACAAAAGCATCGTGGAAACAAAGACGCAGTTAGCTGAAGTCAAATCTATATTAAAAGTTGGTGAATATAGCAATCCTGGAAAATCCTGTTTGGACATTCTTCAGCGGGCAAAAACAGTATCTTTGGCAAATGGAGAATACTGGATTAAATTGGACAATAAACCACTAAAAGTATACTGTGACATGAAAGCTGACGGAGGTGGCTGGACATTGGTTAGTAACCTCGTTCTAAAGAATTCGAATGGAATGGATTGGTCTCTCCAGAATGATTATCGTCAAATTAGTGAGTACGAAAACCAAAAGCTCGCTCTTTCAACATATGCTCTTCGTGACTTGGGATCGAAAATGTCGTTCAATCAAGTCAGATTTTTTTGTCGAAAAACGACTCCGGGACGAGTCTTTGATATCGCAACAAATAAAACCAACAATCTTGGTCAACAAGTTGTTAAGTATTTTGCTGCTCAGTCGAACACCCTTCCCAATAGTTGTGGATCTTATTATCGTTTACCCGATGACAATTCAATTCTGGCCAGTGAGTGTTCCCGATGGGGTTATCAATCAAAGTATTTTGTTGGTAAATGGCATCATGGTGGTTATCCCATCAAAGATCGCTTATTTAATCACGCGGCATTTGTTGGAGGCTACGTTCATTGGCTAGTTCAGCCTTCAAATGACCGTTGGGAATGCGATGATTTTGTATCATCCTCAGGATACACTAAATCGCCAAACGATTTTTGGAAAATTTTCGTTCGTTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20692	GNBP3; gram-negative bacteria-binding protein 3	-	Toll and Imd signaling pathway	ko04624	deepkoala