Gene detail

Detailed information of XP_028406668.1 in Dendronephthya gigantea

Genomic Location: NW_021163063.1:618036...621442
NR annotation: XP_028406668.1, high mobility group protein B1-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q4H2R2	FACT complex subunit SSRP1 OS=Ciona intestinalis OX=7719 GN=SSRP1 PE=2 SV=1
P07746	High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
Q9YH06	High mobility group protein B1 OS=Gallus gallus OX=9031 GN=HMGB1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR050342	Family	High Mobility Group Box (HMGB)	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301	Molecular Function	DNA binding, bending	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11680	NHP10; non-histone protein 10	-	Chromosome and associated proteins	ko03036	deepkoala