Detailed information of XP_028408036.1 in Dendronephthya gigantea

Genomic Location: NW_021163074.1:904508...913906
NR annotation: XP_028408036.1, lysine-specific demethylase 7B-like isoform X2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CF52Lysine-specific demethylase 7B OS=Danio rerio OX=7955 GN=jhdm1db PE=2 SV=1
Q08D35Lysine-specific demethylase 7A OS=Xenopus tropicalis OX=8364 GN=kdm7a PE=2 SV=1
Q3UWM4Lysine-specific demethylase 7A OS=Mus musculus OX=10090 GN=Kdm7a PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF17811JHDJumonji helical domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR041070DomainJumonji, helical domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan

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