Gene detail

Detailed information of XP_028408382.1 in Dendronephthya gigantea

Genomic Location: NW_021163077.1:17153...22422
NR annotation: XP_028408382.1, CUGBP Elav-like family member 3-A [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96J87	CUGBP Elav-like family member 6 OS=Homo sapiens OX=9606 GN=CELF6 PE=1 SV=1
Q7TN33	CUGBP Elav-like family member 6 OS=Mus musculus OX=10090 GN=Celf6 PE=2 SV=1
Q6DGV1	CUGBP Elav-like family member 4 OS=Danio rerio OX=7955 GN=celf4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24012	RNA BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0000381	Biological Process	regulation of alternative mRNA splicing, via spliceosome	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006376	Biological Process	mRNA splice site recognition	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13207	CUGBP, BRUNOL, CELF; CUG-BP- and ETR3-like factor	-	Spliceosome	ko03041	deepkoala