Detailed information of XP_028409981.1 in Dendronephthya gigantea

Genomic Location: NW_021163090.1:117935...130272
NR annotation: XP_028409981.1, protocadherin-like protein isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
O15943Neural-cadherin OS=Drosophila melanogaster OX=7227 GN=CadN PE=1 SV=2
Q967F4Cadherin-related hmr-1 OS=Caenorhabditis elegans OX=6239 GN=hmr-1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

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