Gene detail

Detailed information of XP_028410297.1 in Dendronephthya gigantea

Genomic Location: NW_021163092.1:194105...206873
NR annotation: XP_028410297.1, protein KINESIN LIGHT CHAIN-RELATED 3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028410297.1

ATGAAGGAAAGCTTGCAAGAAGAACTTTCTCTGGTTGGAATTAAAGTGGAAGGACTGAAGGTGAAGATTGAAAACATGGAGGAGGTGAATGAAAAAAAGGAAGCTATAAACTTGAGATCTCATATCAACAAGGATCTTGGCGAGATGGTAAAACATATGGATGTTGATGGTGATGCAAGTGATGAAATAAAAAGTAATCAGAGAAAAACAGATGATACCGACACGTGTACGACTGAATGTCACTACGACCTTGAAGATCATCCTGAAATAGCTCAAAGGTACTTCAACATTGGTTACATTCAATATCACATGAAAGATTATCAGTCAGCATTAGAATCGCATATGAAAGCTCTCAAAATCAGATTAAAGCATGAGATGAAAGATTACAAATCAGCGTTAGAATCCCATGAAAAAGCTCTTGAAATCAGATTGAAAGTGTATGGAGATGATGACCTTGCAACAGCCGACAGTTATTACAACATTGGATACGCACAACATGATATGAAAGATTATATGTCAGCATTGAGGTCAAAACGAAAAGCTCTTGAAATTCGATTGGGACTACGTGGGGAAGATTATCCTGAGACAGCTGACAGTTACTATAGCATTGGAGTCACACAACATGAGATAAATGAGTACAAATCAGCATTAGAGTCATATCAAAAAGCGCTTGAAATCAGATTAAAAATTTACGGAAAAGATCATGCTGCAACAGCTGACAGTTATTACAATATTGGAGTCACACATGAGGCACAAGACGAATTTAATTCACAACTGGCATCTAAACAAAAAGCTCTTGAAATTAGTCTAAAGCAATACGGAGAAGATCATCCCGACACAGCTAACAGTTACAACAACATTGGATATGCACAAAATAAGATGAAAGACTTCAAGTCAGCATTAGTTTCAAATCAAAAAGCTCTTCACATCAGATTGAAATTATTTAAAGAAGATCATCCCGACACAGCTAACAGTTACCACAGCATTGGATACGCACAACATGAATTAAAAGATTTCAAGTCAGGATTAGTTTCATTTCAAAAATCTCTTCACATCAGATTGAAACTATTTGGAGAAGATCATCCCGACACAGCTAGCAGTTACCACAACATTGGATGCACACAAAATGCGATGAAATATTTCAAGTCAGCATTAGTTTCACATCAAAAAGCTCTTCACATCAGATTAAAACTATATGGAGAAGATCATCCCGACACAGCTGATAGTTACCACAACATTGGATACACACAAAATGAGATTAAAGATTTCAAGTCAGCATTAGTTTCACATCAAAAAGCTCTTCACATCAGATTGAAACTATATGGAGAAGATCATCCCAACACAGCTGACAGTTACAGCAACACTGGATACGCACAAAATGGGATGAAAGATTTCAAATCAGGATTAGTTTCGTATCAAAAAGCTCTTTACATCAGATTGAAACTATATGGAGAAGATCATCCCGACACAGCTAGAACTTACAGCAACTTTGGATACATACAAAATAAGATGAAAGATTTCAAGTCAGCATTAGTTTCATATCAAAAAGCTTTCGAAATCAGTTTAAAACTATTTGGAGAAGATCATCCCGACACAGCAAATAGTTATTTCAGCATCGGCTTTACACAACATGCGATGAAAAATTACAAGTCTGCGTTAGAATCGAAACAAAAAGCTTTCGAAGTCAGATTAAAAATATATGGAGAAAATCATCCCGACACCGTAGAGACGTATCGTGAGATTGGTGTCACGCAACGTTCAATGAGGAACCTCCACGCAGCACTTGACCTGCATCAATATGTCGTACAAGCGCGACTGAAACTGCATGGTGAATACCACGACGATACTGCTTTTAGTTATGTCAGCCTGGGAATCACACAACGCGAGATGAAAGATTACAAGTCTGCTTTAGAATCGCATGAACATGCTCTAAGAATCAGTTTGAATTTGCATGGAGAAAATCATCCTGACACTGCCGATATTTACAGCAACATTGGAGCCACACAATGTGAAATGGGAAACTACAAACCCGCATTAGAGTCGCACAACAAATCACTTCAAATTAGATTGAAATTGTTTGGAGAACATCATCCCGACACAGCTGATAGTTATACCCAAATTGGGATCGCACAACAGGAAATGCAGGATTACAATTCAGCATTGGAGTCCAAACCAAAAGCTCTACAAATCCTAGTAAAACTCTTCGGAGAAGATCATCCTGAGATGGCTGAATATTCTCTCGATATTTTTCGGGTAAAAGGTCTTTTGAATAATAAGGCCAGCCCTGGACAGATACAAAGGAAACCGCCAGTTTGGAGCGATTATTTGTAG

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala