Gene detail

Detailed information of XP_028410876.1 in Dendronephthya gigantea

Genomic Location: NW_021163102.1:814232...819508
NR annotation: XP_028410876.1, gamma-butyrobetaine dioxygenase-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0A4V8H042	[2-(trimethylamino)ethyl]phosphonate dioxygenase OS=Leisingera caerulea OX=506591 GN=tmpA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR003819	Domain	TauD/TfdA-like domain	Interproscan
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008336	Molecular Function	gamma-butyrobetaine dioxygenase activity	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan