Gene detail

Detailed information of XP_028410973.1 in Dendronephthya gigantea

Genomic Location: NW_021163103.1:712164...722756
NR annotation: XP_028410972.1, ninein-like protein isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028410973.1

ATGGAAGAAGACGATCAGGATGTGTACGTAGCACAACTACGTGAGGTTTTTGAGAGTTGTGATCTTGAAAAGAAAGGATTCCTCACCAAACATGGTTTAATAGAATTATGCAAGAAATTACAGTTAGAAGATCAAATACCTAAGCTTATTGCTCAGTTGCTCGGCAACGAAGAGCATGGGAAGGTAAACTTTGAAGATTTCAAGGAAGGTTTTGTCATAGTGTTATCAGATGCAATTGATGGACTGACCGTGTCCAGTGGAGATGAACATGTGCAAGAAATTGAAGAACCGCCCAAAATGGTAGTGAATGACAAACGTTATGGCAGAAGATCGCGTCCTTTTGATGCAAGATATTCAGATGAAAATGGTTCTGCAGATGATGGCGATGTTGAGAGTATTAGTGGCAGTCGGCCAGGTAGTCCTGACATGAAACCTGAAAAGCAAAGAAAAATAGACAACCCTGAGGATGATCGTGAACATAAAATAAACTCGAAAGACAGACGTCTCAGCCGAGCAAATAGCCAGAAATTACGCAAACGAGAGTCTTTCAGAAAACGCGATTCATTAAGAAGGCAGGAATCATTCAAGAAAACAAGTTCTGTTCACACAACCAAGGAAGAAATTCTTGAAGCAAGTGGCCAGATCAATAGTGGAAATACATCTAATAAATGGAGCCCCTATCAATCAATGGACAACTCCGGTTTGTCTTCCCCAACTGAAGAACAACAGTTAAGACAAATTTGGAGTGAAGTGAATGTTGGGGCGAATGGTTTTCTCGATAAGAACGAGTTGTCTGTTGTTTGCGAACATATTGGCATGGATGGAATTGATGAAGATGAGTTATCTTTGTTATTTGACGAGTTGGATGATGACCACAATGGTCAAGTCAGTTTTGAAGAATTTCTTCATGGTCTTTTCATGGCACGAGACAAAAGTCAGGAATCTGATCATACCTCTTGTTCTGATGGATTGCCTGACGGACTCGAGAGTCCAAGAAATGCCCTTCCTGGAGGAGGCAAGAATGCCACAGATCAGCCAATGACGTCAACACTGTCCCGTACTGTGAGAACTATTGAAGGAAATCTTCTTCAAGTTTTAGATCCAGAAAATACAGGCTTGGCAAGGGTTGATGACGTTAGGGATTTGTGGCAGGCTCAAGAAAACACAGAAGCTCTTGAATTACTCAAGCATGCTGATATAGACAGTGAAGGGAAAGTCAATTTATCCCACCTCACATCTATGTTGGAATCTGTTATATACGAAAAGAGTGATGCTCTTTGCCAAGCTGTCGTCAGTATATTTAAACATGAACTTTCATATATGAGGAACCATGTTGAATCGTGTAATATTGAAAAGGAGAAGTTGTTAGAAAACGCGAACAATTTAGTGCTCGAGAAATCTGCGTTGATACGAGAAAGCGAAGAAAGTACTCGCCAGTTGGAACATCAATTTGGAGTTAAATTAAAGCAACATGAAGAAGCATTCAATGAGAAACTCCAACTAGCTCAAAATCGTGCAGCCGCCGACCAGGATAAAGCAATCGCGACATTTTCTAAAAAAGTCCTGGAACTAGAGAGAGAAATAGATCGGTACAAGGCAGATGATGCCCGAGTGAAGCAAGAGATTGGGGAGAGGGAGGATGAGATTGGAAGACTGGACTCTACCCTTAACGAAACACAAGAAACCCTTGAAGAGTCGGAGCGTGTTCGTGCAAGATTAGAGAAGGAATTAGGAAACGCTGCTGGTCTCTCTAGAAAGCTTGCAGAAGTCGTAAGTGAACGTGACATTTTGAAGCAACAGCAGGGTCAACATGCAACGAAAGGAATAAGAGAAATGGAAAAAATAAACAGGCAACTACGTGACGAGAACGATGAGCTCAAAAGCGAAGTTGAGATGTTAAAATCTCAAGCAAAAACAAACGTGAAACGTAACCGTAGTCATCGTAGACGCACAACAGACAGAATAACCAGAGTTGGCTCTGTTCTCTCTGATTACACCAAACCTGTTATTATCAAGAGAAATAAAGACGGAGCGACTTCGTCTGATGATTCTGAACGCGATGATATTGATGGGAAGCCTTCTATCGTGCGTGTCAGCGGTGATGGTGGATCTAATGAAGATGAGCAAAAAACAGCAGCATTAAACAACGAACAAAGAAAAACTATCGAGGACTTGACGACGAAGCTAAATGAAAACGCAGAAAAGATCAAGGAACTTCAGAACACAATTCGTCTCCAAGAACAAAACATCAAAACAAAAGATGGATCGATAAATAAACAAAAAACATCATTAGAGAAACTGAAAAATGAAATGAAAGAAAAGACGAATGATCTCGTTGAAAAATCAGACGTAATCGAACGACTTCAAAGTGATTTAAAAGCAAAAGAGGAAGAGAAGCAGTTGTGCGAAAATCAATTACAAGAAATTCAAAAGAAAACAGACTCGACCATACGTGACAATGAGGCAAACATCAGAAACTTGAAAACTGAGATTGAGTCTTTAAAACGAATAAATAATTCAGAAAGTTCCGAACTAAAGGATCGCTTTAATAAAGAGCTGGGAAACCTTACTTCACAATTCACCGCCGAGATGGAAGATCTTCAACAAAGATTCAGTGCGGAGAAAGACGAAATGGAAGCAGATTTTCAAAAAAAATACAAGAAACTTCAAGAGGAATATCAAGGAACACTTGAGACAATTACTGAGCTTAAAAGTAGTTTTAAAATAGAGAAAAAGTTGCTTTTGGATGAAGTTCATGAAGAAACGTCTGAGCTTGAGACAGGATTTGAGAACCAAAAAGAATTGTTAAAACAGTCTTATGAAGAAGAACTACAGGCTTGTAAACAGAAACATTCCGAAGAATTAGAGAATTTACAGAATGCTGTGAATGCTCTCCGTGATGAAAAAAAACAACTGGAAGGATTTTTTGAGAAAGAGAAGCTACAAATTAATCAACAGTTCGCAGAAGAGAAAGCTGAAATTGAGCAGGAAAAGGCTGAAATAGAGGAACGAATTTCGGCTGAATTAGAAAGAGAAAAGCAACGCTATTTTAGCGAAAAAACAAACTCAACGGCAGATTACCGAGAGCTTAAAAATGCGTTAGAAGAACAATTTATGCAGGAAATATCTAATTTAGAGAGTAAATTTTCTCGAGAGAAGCTTGAACTTGAACAGACGGTTCAAGAATTACGACAGGTTTTTAATCAGGGAGAAGATGGGCTTAAAGGGAAATTGAAAGAAGATTTTACGCGTTTGGTTACTGCTCATAAAACAATGCTGGAAAATCAAAATACTAAATACGAAGATGAGATTAAGACTTTAAAAAATGAAGGAGAGAAACATAATGAAGAAATTAAAAAATTGAAAGAAGAAATTTTAAATTTGAAAGAAGTCCATGAAGTGGAAGTAGACGAAATTGAAAAAAGATTGAGAAGAGAACACGATATTCTTGAGCTGGAACTCATTGAAAAGAACGAACGTCTTGAAACATTACAAGATAAAGTTTCGTTATTAGCTGCTGAGAACTCTACACAAAGCGGGCTGGAAACTGAAAGCGAAGTTGAACAACTTCATCTTGAGATCGAGCAACTACGCGAAGACTCGGCAAAGAAATGTCGCGTACTTGAGCGGACTGTGGAAAGACTTCGTTCTGAAAAGAATAATATTCTTGAAAACGAGTTCAAGAAATTAACGTCACGCAGTGACCTCGAGAGAAAGATTGAGAAGTTAGAGAACGAGAAGAGAAGCCTGGCACGAGAACGAATTAAAACTGAAGAAGAACTAAGACAAGAAATTAGCAGATTACAACTAAAATTAGATGAAGTACAGGATTTAGTGAACAGAAGTGATGAGAAAGTTATCTTGACAGATAAGGCAAGAAAGGATTTATATTCGTTGGAACGGACGGTGGAGGAGATTGAAAAAGAAAGAAAGTCGTTAGAGAATTCCTTATATCAACAAAATATTAAAAACACGAGTCTGCAGGATGAAATATCGGACTTAAGACGACGAAATGTGAATGTGGAGAATAGATACAAAAGTGAATTAGACGCAGAGCGAGAAAAGGTTAATCTAGTCCGGACGGAGATGAGCACAGCAAAATCAAAGTTCACAAGAGATTTGTCTGACCTTCATGATAAACTAAAGCGAGCTTTGAGTAATAGTGAAAAAGATCAAACAGCCAGGGACAAGATATTAAATGAAGCCAAAGTCGAGATACTAACGCTTAGTAAGAAGCTTGAAGAGAAAGCGAGGCGATGTCGGGATCTAGAGGACGAAAGATCGACGTGGGAGGAGAGAGTAAGGATGTTAGACCGCCAGAGACGTGAGATGGAATTACGGGTGAAGAAAACTCAAGATTCTGTAGATGATCACGTAAAACAACTTTGTAAACAGCTGGAAGAAAGTCGAGCTCGCTGTGTACGTACCGACACATTGATTCAAGAACTTTATATAGAGAATGCTGAACTCACTAAATCTCTTCAGGAAACTGAAGCTTCCCAAAAGAAAGCTGAGAAAAGCAACAGACAACTTGTTGAACAGAAACGAGCTTTACAGAGAGTTATTTCCAAACTGTGTGGAGCCAATGCTCTCGCCTAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q9Y2I6	Ninein-like protein OS=Homo sapiens OX=9606 GN=NINL PE=1 SV=2
G9G127	Ninein-like protein OS=Danio rerio OX=7955 GN=Ninl PE=1 SV=1
Q6ZQ12	Ninein-like protein OS=Mus musculus OX=10090 GN=Ninl PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18905	NINEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0034454	Biological Process	microtubule anchoring at centrosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16477	NINL, NLP; ninein-like protein	-	Chromosome and associated proteins	ko03036	deepkoala