Gene detail

Detailed information of XP_028411929.1 in Dendronephthya gigantea

Genomic Location: NW_021163012.1:3308956...3335193
NR annotation: XP_028411929.1, dimethyladenosine transferase 1, mitochondrial-like isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q28HM1	Dimethyladenosine transferase 1, mitochondrial OS=Xenopus tropicalis OX=8364 GN=tfb1m PE=2 SV=1
Q7T0W5	Dimethyladenosine transferase 1, mitochondrial OS=Xenopus laevis OX=8355 GN=tfb1m.L PE=2 SV=1
Q811P6	Dimethyladenosine transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tfb1m PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00398	RrnaAD	Ribosomal RNA adenine dimethylase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001737	Family	Ribosomal RNA adenine methyltransferase KsgA/Erm	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR020598	Domain	Ribosomal RNA adenine methylase transferase, N-terminal	Interproscan
IPR023165	Homologous_superfamily	rRNA adenine dimethylase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11727	DIMETHYLADENOSINE TRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000154	Biological Process	rRNA modification	Interproscan
GO:0000179	Molecular Function	rRNA (adenine-N6,N6-)-dimethyltransferase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006391	Biological Process	transcription initiation at mitochondrial promoter	Interproscan
GO:0031167	Biological Process	rRNA methylation	Interproscan
GO:0034246	Molecular Function	mitochondrial transcription factor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15266	TFB1M; dimethyladenosine transferase 1, mitochondrial	EC:2.1.1.-	Mitochondrial biogenesis	ko03029	deepkoala