Gene detail

Detailed information of XP_028412672.1 in Dendronephthya gigantea

Genomic Location: NW_021163131.1:220973...283743
NR annotation: XP_028412672.1, CD97 antigen-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028412672.1

ATGCGTTTCATAATAATTCTTTCCATCATCCTTTTTCTTTCTTCTCAATTGTGGATTTGCCGAGCCCGACTACCAGAAATTAAGAACACAAAAGCCCCTGGCACCCCTGCAAATGGTGTGAGATTATTTAATAAAGAACCAGAAATTGACATAAAAGCCTCTCGCATTCGTGTGGAATTAAATAATGAAGAACCAGATATTGACATAAAAGCCTCTGGCATTCGTGTGGAATTAAATAATAAAGAAGACGAAATTGAGAACCCAAAAGCCCCTGTCATCAGATTATCTAATAAAGGTCTGCACCGGGGTTTCAACGAATGTGCGTCGGCAAATAAATGCCATCATCAAGCCAAATGTATCAAAATGGTTCGCTCATACTCATGTGTTTGTAATGATGGATTTACAGGGGATGGAATTAGGAGATGCAACGATTTAGATGAATGTAAGTCCTCGGCTGCTCAACGGTGCCATCCTCAAGCAAAATGTTTCAACACTGTTGGCTCATACTATTGTGCTTGTAAAACAGGATTTGAAGGGGACGGAATTAAAACTTGCAAAGATTTCAACGAATGTGCGTCGGCAACTAAATGCCATTCTCAAGCAAAATGTATCAACAGTGTTGGCTCATACTCATGTGTTTGTAATAATGGATTTACAGGAGATGGAATTAAGACATGTAACGATTTAGATGAATGTAAGTCCTCGGCTGCTCAACGGTGCCATTCTCAAGCAAAATGTTTCAACACTTTTGGCTCATACAATTGCGCTTGTAAAAAAGGATTTGAAGGGGACGGAGTGAAAACTTGCAAAGACATGGATGAATGCACAACGGGAAATTACAAATGCCATCCAAACGCAACATGCAAAAATACCGTTGGATCATACATATGTTCTTGTAATGAAGGTTTCATTGGGAATGGAACAGACTGTAAAGGCATCGACAAGTGTATTAATCAAGAATGGACATGTGACTGTAACTTAAGTAGAGAATCATTTAATACAAGCAAGAAAGAAAGACTGAGACAACTTCACGATGAGGTAGATCGACTATTTGAAAAGAATATAACAACCAAAAGAAGCTGCGCACCAATTATTATCGACGAGTTATCAAAAATAACAGCTTATGAAGACCAAGAAGAAATGTTGGACCAAGAAATTCTTATTCAAACAGTTGAAATCCTACTAAAAATCGTCGACTTTAATATTGCTGATGACATTATGAACATTATGGTTCCTGCAAATAATATACTGGATGTTAGATACGAAAAATCGTGGCGAAATATGACGGACGGTAAAGAGGCCCGCAAACTGGTGGCAACTTTGCAAAAATATGGCGTTCAAAGCGGGAATATCCTAAAAAACAAAAATACCTCCCATACATTTCAAAATTTTCCCAACGTACAACTACGTGTTAATTACATGAATTCGTCAGAATTTTCACCTCAGGACCGACTTTTCAATTTCCCAAATGCATCTTTCAATATCTCACGAGATGCACTTCCAAAGAATTCAGGTGCTGTGGTTGTTGTCGTATGGTATAAGACACTAAATTCATTTTTGACGAAGAATATTTACGACGGTAATAATTATGCAATTAAGAGCAGGATAATCAGTGCAAGTGTTCAACCTGAAGCAACTAGGATTCCATTCAAACAGCCGGTTCGCATCCACTGGAAAGAAAACGTATTGAACGACCCAAAGACTTGCGTATATTGGAAACCAGAATTATACGATAACTTGTGGAAATCGGATGGATGTAAAAGAGTTGATTCATTAGATAACGACTTGATATGCGAATGTGACCATCACACGGCCTTCGCCACCATGGACACTTGGGAAAGAGATTTGTTAAGTGAAACTGAACAGAAAAGCTTGGAAATTGTATCCACGATTGGTTGTTCCTTATCACTTGTTGGTGTAATTTTGACTATATTGGCACACGCAGTGCTGTGGAAGAGACTTCATAAAATAACCGACTGCAAAGTTCCCTCTAAAGTGTTAATGAATCTATGTGCCGCTATTGGAATGACGGATATCCTTGCTGTTCTTGCCGGACCTGCACGCAAAAATGAGTTATTTTGTATAACAGTTTCCATTTTACTGTATCTCTCAGTACTAGCCCTATTTGGATGGATGCTATGCCAGGGAATTGTTATCTACCTTAAACTAATGCATGTTTACGCTAGTATGAATTTGAGTGGAAGATATATGAAGGCATTTTATGCAATAGGTTGGGGTTTTCCAGTTTTCATTGTGGCGCTGTTGGTTGGGTTGAATGATCGCATTGACTTTAAATCAAAACAAGGGTGTTGGTGCCGTGCTGGTGGAGTGTTATTCTGGACTTTTATTGCTACTATAGGAATAATACTTCTGATCAACGTTTTTGTTTTTGTTCTCGCCTTACGAAAAGTGTTATCGACCAGCGAAGTAAGGTCAAGTTGTTCAGACCCTGACAACAAGTTCAAAAAGGCAAAAAAGGGTCTGATAGGTTCAGGCACTCTTCTACCAGTTCTTGGATTGACGTGGGTGTTTGCCTTGCTGGTATTCAACCGAGATACAATTGCGTTTAATAAACTATTTGAATAA

Transcript

Protein

Uniprot

Uniprot term	Description
G5ECX0	Latrophilin-like protein LAT-2 OS=Caenorhabditis elegans OX=6239 GN=lat-2 PE=2 SV=1
Q6QNK2	Adhesion G-protein coupled receptor D1 OS=Homo sapiens OX=9606 GN=ADGRD1 PE=1 SV=1
Q96K78	Adhesion G-protein coupled receptor G7 OS=Homo sapiens OX=9606 GN=ADGRG7 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR024731	Domain	EGF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan