Gene detail

Detailed information of XP_028413381.1 in Dendronephthya gigantea

Genomic Location: NW_021163142.1:330571...337195
NR annotation: XP_028413381.1, ankyrin-3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028413381.1

ATGACTGAACTCAAGGAAGATGATAATGTTATGATGTCCCAGGCTGAGGACAGCGACGTAACTTCAAGCTTTACGGAAAACAATAATAGCGCTTCGTCCCAAAATAAACAAGCCCAGTCAGTTAATAAACAGAAAGAAGTTGAAGATGAACTCCAAGAAAAAGGCATTCAAAACGAAGAATGTGATGGCGGTATTGAGAAAAAGAAAGAGGCAAGTGGAAGCATAAATGTCTGTGAAGAAAGAAAACAATTTTGGGACGAAATAAGAAAGGACGTTGAACGTGGTGAAAACAAAAAAGATCTTTGGAAGATGACAATTCTGTGCCGTGCTTTTCAGTTTAGTCCAGTAGATCAAGTAGATGCGCTAGAAATTGTAAAGTATTTGGTTGAAAATGGCGCTGATGTAAATGGATATGCTATTGACAGAAGGACTGCTTTTGATTGGAACGCTACTGACGGATGGACAGTGCTGCACGTTGCAGTTACTAAATGTACGTTAGAAATCGTGAATTATCTAGTTGAAAGCGGCGCTGATGTAAATGGGAAGGCTACTGACGGATGGACAGTGCTGCACGTTGCAGTTACTGAAAGTACGTTAGAAATGGTGAAATATCTAGTTGAAAACGGCGCAGATGTAAATGAAAAGGATATTATCGGGAAGACAGTGCTGCACTATGCTGTTACTAGAGATGCGTCAGAAATGGTAAAGTGTCTTGTTGAAAATGGCGCTGATGTAAATGGAAAGGCTACTGACGGATGGACAGTGCTGCACGCTGCTGTTTCTAAAGATGCGCTAGAAATTGTAAAGTATCTTGTTGAAAATGGCGCTGATGTAAATGGAAATGCTACTGACGGATGGACAGTGCTGCACGCTGCTGTTTTTAAAGATGCGCTAGAAATTGTAAAGTATCTTGTTGAAAATGGCGCTGATGTAAATGGCAATGCTACTGACGGATGGACAGTGCTGCACGCTGCCGTTTTTAAAGATGCGCTAGAAATTGTAAAGTATCTTGTTGAAAATGGCGCTGATGTAAATGGAAATGCTACTGACGGATGGACAGTGCTGCATGTTGCAGTTACTGAAAGTACGTTAGAAATGGTGAAATATCTTGTGGGATATGGCGCTGATGTAAATGGAAAGAATAATAACAAATATACAGTCCTAGACACTGCTGTTAAAAAGGGGTGGCTAGAGATGGTAAAATACCTTGTTGAGAATGGTGCTGATGTAAATGGTAAGGGTCTTGAAAGTAAAATTAACGCTTCTACACTTGGTACTGATATCCTAAAGATAGCTGTTGTGAACAATTCAGCTGTTTTGGTCAACCTTTTGTTGAAAAAGAACGTTACTGTGCGGAGAGCTCAAACATTTCTTGTTAAAGGCAGACAGATGAGTCTTCTTGAATGGAGTGTTCGCTTTGGTCATGATGAGATTGCAACTATCCTCAGGCGCTCCGTTAAACATCGTGAGAAAATTGAAATTTTGAAAACAAAGAATTGCAATAAGTTAGACAAGATTGGCATTCCGATGCAGGCTTTTGTCGCCGACAAGCAATTCAGAATTGGCGATGGTGGATATTCAAGTGTCTATGTTGGTCTCATGGAGGATGGGACTGAAGTTGCTGTTAAGAAAATGCTGGTACAAAAGTGTGATAAAATAGCTGAAAACGAAAGGGAAATTATGGATCTTATTAAAACAAGCGACTCACCATTTATAGTGAGTTATCGACATTTTCACCGTGACGATACCTTCATATATCTTATTCTTGATCTTTGCGAAGAAACCTTAATGGAACTTGTTCATGCATCCAGTATTGAACATCTACAAGAGCGTGGTCCACGAATGATTAAGGAAATTCTTTCAGGACTTGAATTTCTTCATGGTAAAAGAATATTGCACAGAGATCTAAAACCATCAAACGTCCTGGCTGATATCGAGGGTCGCGTGAAATTGGCAGATTTTGGATTAAGCCGCGTTCTAAAAGACGATGAAACTACAGTTGAAACAGATGCTAAAGGCACTCACGGATGGATGCCAACAGAAGTAATTGAAGCAATAGACAAAGAAGAAAAAGGTTTGAACAAATGA

Transcript

Protein

Uniprot

Uniprot term	Description
F4HQ17	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2
A9RVK2	Mitogen-activated protein kinase kinase kinase 1b OS=Physcomitrium patens OX=3218 GN=MEKK1b PE=2 SV=2
Q9C6K9	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR051616	Family	Cul2-RING E3 ligase substrate-recognition	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46224	ANKYRIN REPEAT FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan