Detailed information of XP_028413796.1 in Dendronephthya gigantea

Genomic Location: NW_021163152.1:302169...305618
NR annotation: XP_028413796.1, E3 ubiquitin-protein ligase TRIM56-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q56R14E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Q6E2N3E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio OX=7955 GN=trim33 PE=2 SV=1
Q9UPN9E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens OX=9606 GN=TRIM33 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07534TLDTLDDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006571DomainTLDc domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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