Detailed information of XP_028414183.1 in Dendronephthya gigantea

Genomic Location: NW_021163012.1:2224972...2233090
NR annotation: XP_028414183.1, tyrosine--tRNA ligase, cytoplasmic-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4KM49Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars1 PE=2 SV=3
Q5R8T5Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=YARS1 PE=2 SV=3
P54577Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan
PF01588tRNA_bindPutative tRNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR002307FamilyTyrosine-tRNA ligaseInterproscan
IPR051270FamilyTyrosine-tRNA ligase and regulatory proteinInterproscan
IPR002547DomaintRNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11586TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004831Molecular Functiontyrosine-tRNA ligase activityInterproscan
GO:0006437Biological Processtyrosyl-tRNA aminoacylationInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01866YARS, tyrS; tyrosyl-tRNA synthetaseEC:6.1.1.1
Mitochondrial biogenesisko03029deepkoala

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