Gene detail

Detailed information of XP_028414894.1 in Dendronephthya gigantea

Genomic Location: NW_021163181.1:189074...195875
NR annotation: XP_028414894.1, uncharacterized protein LOC114537981 isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028414894.1

ATGTCTGAAAATTCTAATACTTTCGAAAAAGCATCAAGGTTTTCGAGAATAATTAAAAATGCCGTAGATCAGCTTGAACGTGAATTAGCTTCGCCTTCCTCCATCGGTAATAACCAGCCCGGTGCCAGTACGAGTGCTGGCACTGCAAATAATTCAAGAATGAATCCACCTCGACCACCTGCAGTGAACCAAGCTCAAGTGCAACAAGATTTCAGGAATGCATTTCCTGGATTGGCAAACAGACAGGCTAAGAGACCGTCAAACCCATTTGTCAACACTCAGAATAAATCATCTAAAAGGCCATTTATTCCTCCGAAAGAAACGTGGACCCACGATTTTTGTGTCCTTAGTGATATGAATGCCCAGATGACACCAAACAAGGAGGAACTTGAGCAATTAAGAAAAGCTGGTTTGGGAAGAAAAAAAATTGTATTCCCAAATAAAAATGCCGATTTCAATGCATTTTCCGCAGTCGTCCTGGAGAAATATCCAAAATTAAAGAACAGTGGGGGGTTTCAATTGCTGCGAGCAGTTGGAGGTGGAGGAGGAGTGCGAAACCTTGATTTAATCATTCCTGACATCAATGGGTACTCTATCCCTTACCTTAGAGAGTCTCAGTGCTTAGGCCAAGCAATATTATACGTTAGACCATTGCAGGCAAATTTGCCAATGAATAACGAGGACTTTGAAGAGAGTGTGGAATGTTCTGTTATGGTCAACTGTATTACCTGCAATAAAAGCTTCCCGTTTCTCAATATACAAGTTCATAGGGCAGAGTGCTGTGCAAATAATGAAGATAACGATGATAAAGGATCAAATTTAAACAATAGATCAAGGGCAGAAACAAGTACAAATAGTGTTGCGTTACATGCAAATACACAATATTTGGAGGTGGAAACAACGAGTAGAGAAGTTTCTGAGAGATCGGTTGCAAAATCGGAGGATTGTTTAACACAGGAAATTCGTCGTTTAAAGGAGGTATTCCCAGACCTTGAAGAAAATTCTATTCTTGGTGCACTCCGTGAAAGTGATTACGACAGTGAGGAAGCAGTCAACCTTTTGCTTGGAATGAATGAAACAGATCCTTCCACTTCATTGGAAAAGCAGTTAAACATTTATACCAGCAGTATGAATGAAGATTGCGTTAAGATACTTAACGTAGAACGTGAGACATTGTGGCAAAGGGCTCTGATTTTTTACAAATCAACTCCACGCAAGGAGCTGTATAAACGGCTAAGCGTAATGTTCGAGGGTCTTGAAAGTGCTATTGATGCGGGTGCTTTACGGCTGGAATATTTCGGTGACTTGATACGACTGGTGGACAACAAGCTGTTTGAAGGAAATGATCTTCACCGAATCCCATGTCATAGTTGGGATAAAGTTCATTTATTACAGATGGCTGGTTTGATGATATCGCATTCAATCCTCCAGAAAGGCCCAGGAATGCCTACATTAGCACCGTATGTATATGAATATATTTCTTCTGAAAACAAAAATAAAGCAGTGGCACTTATCAATCAAGATGATCTCCCGGTTACCCCACAAAATCGCGATTTGTCTACCTTTATTAACAAGATTTCTGACGCAACGACTGATGAAGAACTAGGAAGTTTGCTAGACGATCCAGTGAATTGCGCCATAGTTGACCGCTCAGGGTGGCCTGTTGAGCGAATAATCAGTTTACGTTCAAGAGTTGATTTCATTAGCCAAATCTTAATCGAAGAGCTCTTCGATAAGCGTCTCTCTGGGCTGAATAGCTTCAAAGAAGGACTAAACCATTTTGGCCTGCTTGATTTGATAAAAAAACAACCAACTATATGGAGACCTATGTTTTCCAGAAGTGGTGACGAAGTATATGCTAGTATGTTAAACGCTAGCTCGTTTTTGTCACTGATCGAATCTGATCCAATCAATGAACTGGAGAAGAGTGCTTATTCACATTTTCTGAATTTCATAAACGAGGCAGAAAATTTGACAGAATATATCCCAGTCATCGGGAAAGAAGTTCCAGTTTTGAACCTCTTATTAAAGTTCAGTACGGCGCATTTAGACATCCCACCACTTGGTTTATCTTCTAAGATCAGAATTTTGTATGGAAGAGATACTATGTCAATGCCAGATTCTGATGCTTGCTTTAACAAACTTACACTACCTGTTTGTTATGCCAACGGAGATGAATTTCGTAAAGTTATGCTGGCAACACTGCGTCATGGCTCTTGTTCGTTTACAGCTTCCCGATAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02845	CUE	CUE domain	Domain	Interproscan
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003892	Domain	Ubiquitin system component CUE	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan