Gene detail

Detailed information of XP_028415310.1 in Dendronephthya gigantea

Genomic Location: NW_021163191.1:258179...278433
NR annotation: XP_028415310.1, proto-oncogene tyrosine-protein kinase receptor Ret-like isoform X4 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028415310.1

ATGCTATTCACGATGCGCTCTTGCGAGCAAGTATTCCGCCTTCTGATTACGGTGATTGCATTGTGTGGGGCTCTGGAGGTAAATATCACAGGATGTGAAAAAGACTGCAAGAAGAACCTGTTTAAGAGACAAAAAGATTTCTGCAGCACGACATATTGTGTCCAAAAATATCTTGGCTCTTTAGTGAAAAACGCAAACAGTTCAGAAAGTACTCTACCGAAACCTGTTGCACCGAAACTGGTTGAAGCTGGGTGGCAGAAAATACGAGTACGTTTTAATACAACAGAGCTGAAGAACCACAGCGATGTTGATTATATTTTAGAAGTGAAGCCATTATGGGGTCGTCAAGAGAGAGGCCAGCACTATGTTGTATTTCCTTACATAAAGCCATACCTTCTTACCAATCATACAACGTATACAATTGAGGACCTCGAACCGAATACTGGTTATAAATTTAGAGTGCTTGCTCTAAAACAAAACAGATGGTCAACATTTAGTAACTGGAGTAGTGTCATGAATACAACTGAAGTTTGCGAAGAACCTCCATGTGGCGTAACAAATATCCGCTTGGAATTGACAACCGAGATACCTTATCAAAAAAGAGTGATTTTGAAATCCCTTTTTCGTTGGAAGCGAAGTACTTCGTTCAGTGAAACAAACAAGACTCGGCTGCCTGGCGTTCATCGAGAAATTAAAGTAATAAGCGAGTGTCGAAAGATTTTTAACGACGAAAATAAATTCTCTGAAAGCAAGAACACTGGATTGGATACTTTCATTAAGAAAGAAAATGCAAGCTTCGTCATCGATGGAAAAGATCATCTTTATTATAATTGTTGGTACAAGTTAGAGATGGAGGCTGTGGATAAGTTCGAAGCAACGACGCTTTCCTTAGCAAAAAGAAAATGGATTTTCCATATACCCAAGTGTATAAAGATCAGTAAAACAATTATTTGCGGATGTGAATATGAGTTTGGTGGCGATAAAGTAGTGACAGGCCAGATGAATGTGACTTACAAAAGAACATCAGAAAAAACTGCTACTGTACATTTTACTTGGAATGATGAAATTTGGAGAAATCTGAGTAGCTTTACCTATCACGCGTTTACGATATACCGTGACGAGGACTTTTCCAAACCGGAACCGAAACCTTTCTATATGAAATACTACAATGTAACATCGAAAGTTTCTAGTTACAACGCGACATCACATAATCTAACAATTGGAAAGAAGTATGATGCATATATTAAAGGATTCGCAGATCATCACTGTGAACACGTAGAAAGACATAATCTTTACTTTACTGTCGGTTTTCCATGCGAAAATAAAGTTTGTCCTAGCAATAGTTCGTGTCGTAGAGTTGGAAACCATGGTAAAAAAAGTGAATGTAGATGCCATAGTGGTTTGGTAATGCGTAATCAAGAATGCATAGATGAAAAACCATGCGAGAAAAATCCTTGTGGACCAAAAGAGACATGTAAACCGATTGCGAAAACGGGAAAATATAACTGCACATGCGAAGGCATGTATAGGCCATTAAATGGAACTTGTGAAGATATATGTGTGATTTACCCTTGTGACAACAAAACCGAGAAATGTATACCGAATGCAGCAACCGGGACAGGGATCTGTATATGCAAAGGCGAGCTAGTGAAAAAAAATGGAATCTGTGTTTCAGAAACCAAAAGTAAGAACGTGGATGTTATCCTTGTCGCTGTCTTGACGCCTCTTGCTGTGATTCTGATTGCTATAATCTTCATCGTTTGGTTACGTAGATGTCACAAGAAGCAATTGAGTTTTATAGAAACAGAATTTGAAAACGCTATGGAAACTATAATTTCAAATAGGAGCATCATCAATGTACGATCTATTGATATCGATCTGCTGGGAGATGGAGTGAGTGCAAAAGAGATGAATTTGATTTACGTTTCTCAAGACAACATTTACGAGATTCCAGAATATATATTGGAGCCGATTAGTCGATATGAACTTCCTCCCGATTCTGTGCGATTTCGCGGTCTGATTGGCAAAGGAGCGTTTGGCAGAGTATACGCTGGTGAAGCCCTTGGAATTAACGGCAATCCTGAAGTGACAGCAGTTGCAATAAAAACACTAAAAGAATCCGCTAATGAAGAAGAACTTAGTAATTTTTTACGGGAAATTGATCTAATGAAAGACCTTGGGATACATGAAAATGTCATTAATATGTACGGTTGCTGCACAAAGTGTCGTCCAGTATGCCTAGTGTTGGAATACGCACCAGGTGGAAATTTGCTCAATCACCTGAGAGCTCTTAAAAAGAAGTGTAAAGATATCGTGGCTGCGCAGTCAGACAAAGTGATGAATTCTACCAACGATCATGCAGAAGATTTCCATGCAGAGATCTCGATCAGAATAAAAGAGGAAATTCGAGCTGCTTTGGATTCAAAGGAATTAGAATCGTTTTCGCATCAAATTGCCGCTGGGATGAAACATATTTCTGACCATGGCATCGTTCATCGTGACTTGGCCGCAAGGAATATACTTCTTGGCAAAGACAAAATATTGAAAATATCAGATTTTGGCTTGTCACGTGAAGAAACATACGTGCAAAAACCTAGCGGGAAAGTTCCTTACCGTTGGTTGGCAATTGAAGCAATACAAGAACGAAGTTATTCTACCGCCAGTGACGTCTGGGCGTTTGGAGTTGTTTTGTGGGAAATATGCACATTGGGGGAGATACCTTATTCTGGAGTCTCGGACAGGCAACTCCTCGATTTCCTACGAAGTGGAAAGAGATTGGAGAAAGTTGAAAACTGCACGGATGATATATATAAGATAATGTCCAGGTGCTGGAGTCATCTACCAGAAGACAGACCAACATTTGGAGCACTGTACGAGAAATTGTGGGAACTTCGGAACAAGGGAAAAATCTATGTCAACATAGACAGTCTAATGAAACAATCTCTTGAAACTGAAGATCATGGAAGTTCTGAAGAAACAAGCGAGAGTGATAACAGCGCTGGTGAAAGTATTGACCATGATGGACCACTCATAAGTGCAACTCCACAGAAACCAAATGAAAACAGCGGATACGAAAATGATATTAAAACAAATATCGAACAGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q9VBW3	Tyrosine kinase receptor Cad96Ca OS=Drosophila melanogaster OX=7227 GN=Cad96Ca PE=2 SV=2
P21804	Fibroblast growth factor receptor 1 OS=Gallus gallus OX=9031 GN=FGFR1 PE=2 SV=1
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan