Gene detail

Detailed information of XP_028415555.1 in Dendronephthya gigantea

Genomic Location: NW_021163010.1:6204378...6217248
NR annotation: XP_028415555.1, uncharacterized protein LOC114538589 isoform X2 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028415555.1

ATGGGGCAAGATAGTAGCAAGCTGTCGTCAAAACGTCGTGTTGAACACGGAGAGAAAACGAAATTGTTAAGTAAAGACCATCATGCTGCTGCTATGAAACTGAGTACTTCTGAAGTAAACACTTTGAAGCAGCTTTATCACAGACTTGCAGCTCTATCTCCTGAGGATGAATACATTAACAAACAAACATTTTTGAACTACTTTCCTCTTGAGGGAATATTAGCTGAGAGGTTGTTTGCTACATTTGATAAAGACAAGAATAATGTGATTGATTTAGAAGAATTTCTTGGTGGTCTCGCTTTGTGTCTCGCCGGAACAGTGGATGAAAAATTTCAACTTGTTTTCGACTTGTATAACATTGATGATGGTGATGGTATTTCCGAGGAAGAATTGGCCATAGTTTTGAAGTCAACATTAATCGCTGCAAGAGCAATTGTAGGGCCAATCAAGAATAGCACCCTAGACGAAGAGGTAGTCAAGGAATTGTTTGATGTTGATGAGCATGTTAAGAAAGTCGTTCATGATGCGTTTGAGCAATGTGATACAAGTCAGACTGGAAAACTCTCTCCGGAAGAATTCAGAAACTGGGCAGAACAACATTCATACATTTTGGACATCATATTTGGTCACAAAAGTTTTACCGATAAACAAAAGATTTCGCTGAATATTACAGCTGCAGCCATTAAAGCCGCAGAAATAAATTCTGTCAGATGTCAAAGCCAAACATGGATTGATTCTCCAAATACCCTGGAAAACCAGATAGATAACCATCGTGGATATTCCAAAGCGACGTATTTGTGGAGTCCAGTATTCCCAGTGATGTTAAAGGCTCCTAAAGCTCGCAGTGAACACACAGCATGTGTTTATCAGGGTTCGCTTTACGTTCTGGGAGGAAGAGGCGCCTGCTCTGCCTTTAAAGATTTCTGGAAATATGACTTAGCGCTGAATAACTGGTCTGAATTGCCAAACGTTGATCAAAGACCATCACATATTTTTGGACACACTGCTGTTTTATACAAGGGAAGTATGTATATTTATGGAGGGGAATTTGAATCGTGTGAAACGTTCGTGTGGAAGTACACATTTGACAACAATAATTGGGAGAAAATGAGTTTTTCTGTCTTACCTAATAACAAGGCACCAATGAACAGACGCTACCATTCTGCCGTTGTTTATCAAAAGAAGATGTTCGTTTTTGGCGGATTGATCGAAATTCGAGGTTCGACTGATGAGCTCTGGACTTTTGACTTAGAGGAGCATACGTGGGAGCGGTTAAGTCAGAGCAATGCAGCTCTTCCTGGTAAAAGATATGAACATTCTGCTGTTGTTTACAACAGAGCAATGTGGATCGCCGGTGGACTGGAAGTTTTTGTACCTAGAAATGACGTCTGGAAATGGGAATTCGAGAAAAGTACTTGGTGTAAAATTAAGAGCAGAGGTGGACCATTTCCAATCCGCGGGCATCGTGCTGTTAGATGTGGAAATGGTATGCTGGTGTACGGTGGCAGTACGAATGGAGAGCATCAAAATAAAGTATGGAGACTGGAATTTGAATCATTGTCATGGAACCTTGTCACTCCGCACGGTGGGGTATCTCCTCCGGCGCGCTCTTCTGCGGCTCTCGTCATACTCTCGGCCTTTTCCTTGCCCTTATTACCACCGCAGATGGTAAACACTGCAGACATTTCCACGACGAAGAGTAGGGCAAAAACCTCGATACCTGTCGAAGAAGAACGACCGCATACCTCGCCTGGCGCGAACGGCAATCAAAAGATAACACCATCAAGCGAAAGAAGAGCTCGTCATTGTTCCGTTTCAACGGACTCTGTTTACCGACCGTCATCTTTGACCCCCACTGACAAACGTTGCTCCGCCGGGAGTCTGGATAATCTTGAAAAAAATTTTGTTGCCTTCACTAATGCGTGTTACAGCAGTAGTAGCGAATGGCAGGTTGATAAGAATAATATTTATCCGCTGCATAGAACTTTTCATAACAGATCCCACTCGTTAGAACGACACGAAGAAGAAGGTCCGCAGAACGAAGGGACCGCAGGAGCAAACGAACACAAACTCAACAAAAATATGAATTACGGGGATGACACCTGCACTAGGGCAAGTCAAAATATCGAGGTTTCTCACCCGAAAGAAGGGTTGTGTATCTTCGTTATCGGCGGCAAATATTGCGGGAGTCATGACTGTTTCGCCAAAGGTGTTGATATTTGGAGATGTGACGTTACAAAACGTTGGAAACGAAAAACAAAAATACGAAAAATCAAGGTAGAAACAGCTGACACTGCTAGTATAATTCCTTCTGTGGTGACACAACAGACTGATGCATCTTTTGCAACTTTTAACGAACAAAGCAGCAGCAGAATTGTCAATCCATCCAGACTCGGGGATGTGAGGGTCTCTCCCATCAACAGTTCGAGAAAACTATTTTCTTCAGCATGTCGACAGGATGTTCTCAGGATGTCTGACAGGCAGGTTAAAGTGGAAGATCGTACAGAGGGAGAAAATGTTGAAAGTTACTATGGAGATCTTGTTGTAACTGACTTAGGAAGCTTAAATGAGCCTGTTGTTAATGATTAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q86A72	Recoverin family protein DDB_G0274781 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274781 PE=3 SV=1
P80197	Actin-fragmin kinase OS=Physarum polycephalum OX=5791 PE=1 SV=2
Q2KI69	Kv channel-interacting protein 4 OS=Bos taurus OX=9913 GN=KCNIP4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR051568	Family	LZTR1/Attractin	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46376	LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan