Gene detail

Detailed information of XP_028415807.1 in Dendronephthya gigantea

Genomic Location: NW_021163211.1:36927...50461
NR annotation: XP_028415807.1, histone acetyltransferase KAT2B-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

XP_028415807.1

ATGGCGGACTCACCGGGTACATCTGGAAGCAATCCAGTCAAAAAGGCATCTAGTTCAGCTTTTATTCCTTCTGAGTTGACAAGACCAGCGCATTTGGCACGGATTGGCAATCGAAAGAGTCAAATGAAAGGGCTCCCGAGACAAAAGAAACTAGAAAAACTTGCAAGTTACTCTCAGTGTAAGGGTGACAAACTTTGCAAATGCACTGGATGGAGAAACTCCGCCTCCGCTCCTGGTGGTAACCAAACGACTGCTGAAAATGATAACTCCCAATGTCGAAGCTGTAATCACTCTCTTGCAAGTCATCTATCCACTTTGGATGGCAAACCTGACGAGGAACTTGACAATGTCTTGTCAATTGTGGTTGATGTAGAAACACTGTATGTTTGTGTACATAATGAGAAAGATGAAGACACAAAGAAACTATACACTGGTTTATTCAAATTACTTCGAAAGTGTGTATTTCAAGCCGTTTATATGAAGCCATCCGTTGCCCTAATGGGAAATCCGCCGTTTGAGAGCCCAAGTATTGAAAATGCAATCTTCAAGTTCCTTCATATGAAGTATGAGAACAGCGAAGACAAACAGATGATGCATGATTTAGCCAAAATGTTTATCCACTGCCTCAATAATTGGACGTTAGATACTCCGTCATCAAGGAAGGAACAAGGATACAGCGGTGAAGAAAACAATTTTTACAAAACCAATTATTCGAGGTGGTTATGTTTTTGCCGAGTACCTGTTTTTTGTAACACTTTAACAAAGTACAATCTTTCGCAAGTTTTCGGAAGGAGCTTCTTCCAAGTGGTGTTACCCTCGGTTGGCAGACAAATACTGGATAAGTTCTCAGCTGATAGAGAGAAACTTACTGCAGAGAAACGTGCCATTCTTATCACGCACTTTCCAAGATTTCTTAAAGATCTAGAAGAAGATGTTATGCAAAATGATAGCGTTATCTGGATGCAGGAAATTGAAATCAAAAAGGAAATGGAAGTTGCGCCATCATCTCCTCAAAGTACGAACGATACAAGTGTGGACAGTGGTTTGTTGAGCCCTCGGACTTTGTCATCCTTTCATCTGGCCGCCCCATCGTCTGCGGGTCACGATTTGCACAACAACAAAAGACCGCTAGATTCTGGAACTCCAAAATCAGAAAACAAAAGACAGAAGTTAGCAGGTGATGTTCCTGAGGAAGTTTTCGCTAAAATCGTCGCTGTTGTTACTGAAGAGCATGAGATGTTAGGACCAGAGCGTGGTTTGTACCCTGGGCAACATAGCGCACGAGACGAGGCAGCTCGTTGTGAAGAGAAGCGAGGCGTCATAGAATTTCACGTCGTCGGAAACTCGCTGAGACGACAGCTCTCTCGAGAGAATATCATGTGGTTGATTGGCTTGAAAAACGTATTTTCATATCAACTACCGCGAATGCCGAAAGAATATATCACGAGATTGGTTTTTGATCAGAAACACAAGACATTGGCTTTGGTTAAAGACAACAGACCTATTGGCGGCATTTGCTTTCGTATGTTTCCCACGCAAAATTTTACGGAGATTGTCTTCTGTGCCGTAAGCTCGAATGAACAAGTTAAGGGATACGGTACGCATTTGATGAATCATCTCAAGGACTATCACATTCAACATGGAGTACTCAATTTTTTAACTTATGCAGATGAGTTTGCCATCGGCTACTTTAAGAAACAAGGATTTTCTAAGGAGATTACTTTGGCACGAAATGTTTACCACGGTTATATAAAGGAATATGAAGGAGCAACACTGATGCATTGTATCCTCAATCCCAAGATACAGTATACAGAATTTTCTTCTGTTATAAAGAAACAAAAGGAGATTGTTAAAAAACTTATTCAAAAACGACAAGACGAAATCAAGAAAATCTATCCTGGTTTGACGTGCTTTAAAGAAGGCGTTAGACAGATTCCCGTTGAGAGTATTCCTGGTGTGGACGAGACAGGCTGGAAACCACCGACTAAGACGAGGGCGGATGAAACTGTTGATTCTGAGAAACTTTCCGTTCAGTTGAAGAATATTTTGACACAAGTCAAGAACCACGCGAGTGCCTGGCCTTTCATGAAAGCTGTAGAAGTTTCGGAAGCTCCTGATTATTACGAGTACATCAAGTATCCAATGGACCTTAAAACGATGACAGATCGCCTCAAGGCCGGTTACTACAGCACTAAGAAACTCTTCGCAGCTGACATGATGAGGATTTTTAGCAATTGTCGAACGTACAATGCTCCGGACACTGAGTACTATCGCTGTGCTAATACAATGGAAAGATATTTCCTCAGTAAGATTAAAGAAGTGGGATGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q9JHD1	Histone acetyltransferase KAT2B OS=Mus musculus OX=10090 GN=Kat2b PE=1 SV=2
Q1LUC3	Histone acetyltransferase KAT2B OS=Danio rerio OX=7955 GN=kat2b PE=2 SV=1
Q92831	Histone acetyltransferase KAT2B OS=Homo sapiens OX=9606 GN=KAT2B PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439	Bromodomain	Bromodomain	Domain	Interproscan
PF06466	PCAF_N	PCAF (P300/CBP-associated factor) N-terminal domain	Domain	Interproscan
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487	Domain	Bromodomain	Interproscan
IPR037800	Family	Histone acetyltransferase GCN5	Interproscan
IPR009464	Domain	PCAF, N-terminal	Interproscan
IPR000182	Domain	GNAT domain	Interproscan
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45750	GH11602P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000123	Cellular Component	histone acetyltransferase complex	Interproscan
GO:0004402	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0010484	Molecular Function	histone H3 acetyltransferase activity	Interproscan
GO:0043966	Biological Process	obsolete histone H3 acetylation	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0140672	Cellular Component	ATAC complex	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06062	PCAF, KAT2, GCN5; histone acetyltransferase	EC:2.3.1.48	Chromosome and associated proteins	ko03036	deepkoala