Gene detail

Detailed information of XP_028418057.1 in Dendronephthya gigantea

Genomic Location: NW_021163010.1:2644771...2646651
NR annotation: XP_028418057.1, small ubiquitin-related modifier 1-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q7SZR5	Small ubiquitin-related modifier 1 OS=Danio rerio OX=7955 GN=sumo1 PE=3 SV=1
Q8QGH2	Small ubiquitin-related modifier 1 OS=Gallus gallus OX=9031 GN=SUMO1 PE=3 SV=1
Q5E9D1	Small ubiquitin-related modifier 1 OS=Bos taurus OX=9913 GN=SUMO1 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UBL\|NEDD8
Ubiquitin Family	ULD\|UBL\|SUMO
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11976	Rad60-SLD	Ubiquitin-2 like Rad60 SUMO-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR046332	Domain	Small ubiquitin-related modifier 1, Ubl domain	Interproscan
IPR022617	Domain	Rad60/SUMO-like domain	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016605	Cellular Component	PML body	Interproscan
GO:0016925	Biological Process	protein sumoylation	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0044389	Molecular Function	ubiquitin-like protein ligase binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12160	SUMO, SMT3; small ubiquitin-related modifier	-	Cytoskeleton proteins	ko04812	deepkoala